Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 PVT1_1.1-201ENST00000615125 194 ntBASIC21.02■□□□□ 0.96
HIPK4Q8NE63 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
HIPK4Q8NE63 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HIPK4Q8NE63 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
HIPK4Q8NE63 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIPK4Q8NE63 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HIPK4Q8NE63 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIPK4Q8NE63 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIPK4Q8NE63 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIPK4Q8NE63 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HIPK4Q8NE63 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.01■□□□□ 0.95
HIPK4Q8NE63 AC004448.1-201ENST00000458332 883 ntBASIC21.01■□□□□ 0.95
HIPK4Q8NE63 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIPK4Q8NE63 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIPK4Q8NE63 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21■□□□□ 0.95
HIPK4Q8NE63 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HIPK4Q8NE63 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HIPK4Q8NE63 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HIPK4Q8NE63 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21■□□□□ 0.95
HIPK4Q8NE63 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21■□□□□ 0.95
HIPK4Q8NE63 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21■□□□□ 0.95
HIPK4Q8NE63 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
HIPK4Q8NE63 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HIPK4Q8NE63 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.99■□□□□ 0.95
HIPK4Q8NE63 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIPK4Q8NE63 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HIPK4Q8NE63 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.99■□□□□ 0.95
HIPK4Q8NE63 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIPK4Q8NE63 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIPK4Q8NE63 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HIPK4Q8NE63 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 TSPY13P-201ENST00000338964 914 ntBASIC20.98■□□□□ 0.95
HIPK4Q8NE63 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 AC010980.1-201ENST00000587192 1142 ntBASIC20.98■□□□□ 0.95
HIPK4Q8NE63 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.98■□□□□ 0.95
HIPK4Q8NE63 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.97■□□□□ 0.95
HIPK4Q8NE63 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK4Q8NE63 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
HIPK4Q8NE63 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK4Q8NE63 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK4Q8NE63 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.97■□□□□ 0.95
HIPK4Q8NE63 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
HIPK4Q8NE63 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.97■□□□□ 0.95
HIPK4Q8NE63 AC092667.1-201ENST00000434301 2586 ntBASIC20.96■□□□□ 0.95
HIPK4Q8NE63 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK4Q8NE63 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK4Q8NE63 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.96■□□□□ 0.95
HIPK4Q8NE63 AL157384.1-201ENST00000445995 2473 ntBASIC20.96■□□□□ 0.95
HIPK4Q8NE63 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK4Q8NE63 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.96■□□□□ 0.95
HIPK4Q8NE63 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.96■□□□□ 0.95
HIPK4Q8NE63 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK4Q8NE63 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK4Q8NE63 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HIPK4Q8NE63 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK4Q8NE63 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
HIPK4Q8NE63 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIPK4Q8NE63 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HIPK4Q8NE63 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HIPK4Q8NE63 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
HIPK4Q8NE63 AL121603.2-201ENST00000557373 2117 ntBASIC20.95■□□□□ 0.94
HIPK4Q8NE63 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.95■□□□□ 0.94
HIPK4Q8NE63 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.95■□□□□ 0.94
HIPK4Q8NE63 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HIPK4Q8NE63 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIPK4Q8NE63 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIPK4Q8NE63 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK4Q8NE63 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms