Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDH20Q8N6Y1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDH20Q8N6Y1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH20Q8N6Y1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDH20Q8N6Y1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 AC012414.1-201ENST00000556676 535 ntBASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH20Q8N6Y1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 AC026271.2-201ENST00000428091 497 ntBASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 AL354811.1-201ENST00000610286 706 ntBASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH20Q8N6Y1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDH20Q8N6Y1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH20Q8N6Y1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH20Q8N6Y1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH20Q8N6Y1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDH20Q8N6Y1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDH20Q8N6Y1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH20Q8N6Y1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDH20Q8N6Y1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PCDH20Q8N6Y1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.16■■□□□ 1.14
PCDH20Q8N6Y1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 MIR6821-201ENST00000617625 74 ntBASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 AC105233.4-201ENST00000642045 216 ntBASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDH20Q8N6Y1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
PCDH20Q8N6Y1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.14■■□□□ 1.14
PCDH20Q8N6Y1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH20Q8N6Y1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDH20Q8N6Y1 LINC01960-201ENST00000563759 1884 ntBASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 AC027612.3-201ENST00000413684 1047 ntBASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 AC097381.1-201ENST00000429019 1296 ntBASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 OXCT2P1-201ENST00000447263 1535 ntBASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDH20Q8N6Y1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH20Q8N6Y1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDH20Q8N6Y1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH20Q8N6Y1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH20Q8N6Y1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
PCDH20Q8N6Y1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms