Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM59Q8IWR1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TRIM59Q8IWR1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.74■■□□□ 1.39
TRIM59Q8IWR1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM59Q8IWR1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM59Q8IWR1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.74■■□□□ 1.39
TRIM59Q8IWR1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TRIM59Q8IWR1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TRIM59Q8IWR1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM59Q8IWR1 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.73■■□□□ 1.39
TRIM59Q8IWR1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM59Q8IWR1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM59Q8IWR1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM59Q8IWR1 SERBP1P1-201ENST00000396021 1160 ntBASIC23.72■■□□□ 1.39
TRIM59Q8IWR1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
TRIM59Q8IWR1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM59Q8IWR1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM59Q8IWR1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
TRIM59Q8IWR1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM59Q8IWR1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
TRIM59Q8IWR1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM59Q8IWR1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM59Q8IWR1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM59Q8IWR1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 AL138724.1-201ENST00000606771 1088 ntBASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM59Q8IWR1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRIM59Q8IWR1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.7■■□□□ 1.39
TRIM59Q8IWR1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRIM59Q8IWR1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM59Q8IWR1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM59Q8IWR1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM59Q8IWR1 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM59Q8IWR1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM59Q8IWR1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.7■■□□□ 1.38
TRIM59Q8IWR1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM59Q8IWR1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM59Q8IWR1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM59Q8IWR1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM59Q8IWR1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM59Q8IWR1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM59Q8IWR1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM59Q8IWR1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
TRIM59Q8IWR1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM59Q8IWR1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM59Q8IWR1 AC010525.1-201ENST00000585559 441 ntBASIC23.69■■□□□ 1.38
TRIM59Q8IWR1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM59Q8IWR1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 AC079089.2-201ENST00000531211 1277 ntBASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 DUX4L19-201ENST00000557448 1267 ntBASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 SYT6-210ENST00000641643 1587 ntBASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
TRIM59Q8IWR1 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 AC068587.7-201ENST00000641602 218 ntBASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM59Q8IWR1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM59Q8IWR1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms