Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
SFTPA1Q8IWL2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SFTPA1Q8IWL2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SFTPA1Q8IWL2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SFTPA1Q8IWL2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.16■■□□□ 1.14
SFTPA1Q8IWL2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SFTPA1Q8IWL2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SFTPA1Q8IWL2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SFTPA1Q8IWL2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 AC092068.2-201ENST00000590491 1708 ntBASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 AC079140.4-201ENST00000507448 529 ntBASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 AC011767.1-201ENST00000617410 1153 ntBASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SFTPA1Q8IWL2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SFTPA1Q8IWL2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SFTPA1Q8IWL2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.14■■□□□ 1.14
SFTPA1Q8IWL2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.14■■□□□ 1.14
SFTPA1Q8IWL2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SFTPA1Q8IWL2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SFTPA1Q8IWL2 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.14■■□□□ 1.13
SFTPA1Q8IWL2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.14■■□□□ 1.13
SFTPA1Q8IWL2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.14■■□□□ 1.13
SFTPA1Q8IWL2 ESRRAP2-201ENST00000418437 1549 ntBASIC22.14■■□□□ 1.13
SFTPA1Q8IWL2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 BID-214ENST00000617586 542 ntTSL 5 BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SFTPA1Q8IWL2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SFTPA1Q8IWL2 KRT19P1-201ENST00000405746 1186 ntBASIC22.12■■□□□ 1.13
SFTPA1Q8IWL2 CROCCP5-201ENST00000436658 830 ntBASIC22.12■■□□□ 1.13
SFTPA1Q8IWL2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.12■■□□□ 1.13
SFTPA1Q8IWL2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.12■■□□□ 1.13
SFTPA1Q8IWL2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SFTPA1Q8IWL2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.12■■□□□ 1.13
SFTPA1Q8IWL2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SFTPA1Q8IWL2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 AC005224.4-201ENST00000583262 1652 ntBASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SFTPA1Q8IWL2 DUSP8P5-201ENST00000422884 1815 ntBASIC22.1■■□□□ 1.13
SFTPA1Q8IWL2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SFTPA1Q8IWL2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SFTPA1Q8IWL2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SFTPA1Q8IWL2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SFTPA1Q8IWL2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SFTPA1Q8IWL2 AC026185.1-201ENST00000445748 174 ntBASIC22.1■■□□□ 1.13
SFTPA1Q8IWL2 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.1■■□□□ 1.13
SFTPA1Q8IWL2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
SFTPA1Q8IWL2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.1■■□□□ 1.13
SFTPA1Q8IWL2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SFTPA1Q8IWL2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SFTPA1Q8IWL2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SFTPA1Q8IWL2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.09■■□□□ 1.13
SFTPA1Q8IWL2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SFTPA1Q8IWL2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
SFTPA1Q8IWL2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SFTPA1Q8IWL2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
SFTPA1Q8IWL2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SFTPA1Q8IWL2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
SFTPA1Q8IWL2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms