Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL23A1Q86Y22 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC27.71■■■□□ 2.03
COL23A1Q86Y22 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.71■■■□□ 2.03
COL23A1Q86Y22 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.71■■■□□ 2.03
COL23A1Q86Y22 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
COL23A1Q86Y22 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.7■■■□□ 2.03
COL23A1Q86Y22 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL23A1Q86Y22 DUSP5P2-201ENST00000426873 1033 ntBASIC27.7■■■□□ 2.02
COL23A1Q86Y22 MARS-234ENST00000630571 216 ntTSL 5 BASIC27.7■■■□□ 2.02
COL23A1Q86Y22 MARS-235ENST00000630803 183 ntTSL 3 BASIC27.7■■■□□ 2.02
COL23A1Q86Y22 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL23A1Q86Y22 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL23A1Q86Y22 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
COL23A1Q86Y22 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
COL23A1Q86Y22 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL23A1Q86Y22 MIPEPP3-201ENST00000412105 444 ntBASIC27.69■■■□□ 2.02
COL23A1Q86Y22 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
COL23A1Q86Y22 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
COL23A1Q86Y22 AC010536.3-201ENST00000620306 533 ntBASIC27.69■■■□□ 2.02
COL23A1Q86Y22 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
COL23A1Q86Y22 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
COL23A1Q86Y22 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC27.68■■■□□ 2.02
COL23A1Q86Y22 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.68■■■□□ 2.02
COL23A1Q86Y22 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
COL23A1Q86Y22 PPP1R14BP2-201ENST00000426284 444 ntBASIC27.68■■■□□ 2.02
COL23A1Q86Y22 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC27.68■■■□□ 2.02
COL23A1Q86Y22 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL23A1Q86Y22 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC27.68■■■□□ 2.02
COL23A1Q86Y22 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL23A1Q86Y22 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.67■■■□□ 2.02
COL23A1Q86Y22 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
COL23A1Q86Y22 AC009237.3-201ENST00000393279 1427 ntBASIC27.67■■■□□ 2.02
COL23A1Q86Y22 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.67■■■□□ 2.02
COL23A1Q86Y22 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL23A1Q86Y22 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL23A1Q86Y22 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
COL23A1Q86Y22 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
COL23A1Q86Y22 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.67■■■□□ 2.02
COL23A1Q86Y22 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
COL23A1Q86Y22 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 AL596275.1-201ENST00000423464 877 ntBASIC27.66■■■□□ 2.02
COL23A1Q86Y22 SERP1-208ENST00000491660 830 ntTSL 2 BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC27.66■■■□□ 2.02
COL23A1Q86Y22 AP003733.4-201ENST00000623785 1697 ntBASIC27.65■■■□□ 2.02
COL23A1Q86Y22 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC27.65■■■□□ 2.02
COL23A1Q86Y22 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.65■■■□□ 2.02
COL23A1Q86Y22 GCSHP5-201ENST00000443090 522 ntBASIC27.65■■■□□ 2.02
COL23A1Q86Y22 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
COL23A1Q86Y22 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
COL23A1Q86Y22 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL23A1Q86Y22 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL23A1Q86Y22 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
COL23A1Q86Y22 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC27.64■■■□□ 2.02
COL23A1Q86Y22 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.64■■■□□ 2.02
COL23A1Q86Y22 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC27.64■■■□□ 2.02
COL23A1Q86Y22 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL23A1Q86Y22 AP006294.2-201ENST00000641667 209 ntBASIC27.64■■■□□ 2.02
COL23A1Q86Y22 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL23A1Q86Y22 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
COL23A1Q86Y22 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.64■■■□□ 2.01
COL23A1Q86Y22 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.64■■■□□ 2.01
COL23A1Q86Y22 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL23A1Q86Y22 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL23A1Q86Y22 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.63■■■□□ 2.01
COL23A1Q86Y22 RHEB-204ENST00000472642 900 ntTSL 3 BASIC27.63■■■□□ 2.01
COL23A1Q86Y22 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC27.63■■■□□ 2.01
COL23A1Q86Y22 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC27.63■■■□□ 2.01
COL23A1Q86Y22 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC27.63■■■□□ 2.01
COL23A1Q86Y22 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
COL23A1Q86Y22 AC079630.1-202ENST00000618127 1840 ntBASIC27.62■■■□□ 2.01
COL23A1Q86Y22 AC022211.4-201ENST00000625094 2161 ntBASIC27.62■■■□□ 2.01
COL23A1Q86Y22 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.62■■■□□ 2.01
COL23A1Q86Y22 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC27.62■■■□□ 2.01
COL23A1Q86Y22 RARRES2P4-201ENST00000514074 484 ntBASIC27.62■■■□□ 2.01
COL23A1Q86Y22 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COL23A1Q86Y22 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
COL23A1Q86Y22 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
COL23A1Q86Y22 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COL23A1Q86Y22 MFF-207ENST00000409565 1548 ntTSL 2 BASIC27.62■■■□□ 2.01
COL23A1Q86Y22 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
COL23A1Q86Y22 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC27.61■■■□□ 2.01
COL23A1Q86Y22 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.61■■■□□ 2.01
COL23A1Q86Y22 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
COL23A1Q86Y22 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
COL23A1Q86Y22 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC27.6■■■□□ 2.01
COL23A1Q86Y22 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC27.6■■■□□ 2.01
COL23A1Q86Y22 MKRN4P-201ENST00000444706 1521 ntBASIC27.6■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms