Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.06■■□□□ 1.28
LRRTM3Q86VH5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.06■■□□□ 1.28
LRRTM3Q86VH5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRRTM3Q86VH5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRRTM3Q86VH5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRRTM3Q86VH5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
LRRTM3Q86VH5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
LRRTM3Q86VH5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.05■■□□□ 1.28
LRRTM3Q86VH5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.05■■□□□ 1.28
LRRTM3Q86VH5 IKBKGP1-201ENST00000612193 1073 ntBASIC23.05■■□□□ 1.28
LRRTM3Q86VH5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
LRRTM3Q86VH5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRRTM3Q86VH5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.05■■□□□ 1.28
LRRTM3Q86VH5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
LRRTM3Q86VH5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRRTM3Q86VH5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
LRRTM3Q86VH5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
LRRTM3Q86VH5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRTM3Q86VH5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRTM3Q86VH5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRTM3Q86VH5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.04■■□□□ 1.28
LRRTM3Q86VH5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.04■■□□□ 1.28
LRRTM3Q86VH5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.04■■□□□ 1.28
LRRTM3Q86VH5 KRT18P61-201ENST00000585825 1298 ntBASIC23.04■■□□□ 1.28
LRRTM3Q86VH5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.04■■□□□ 1.28
LRRTM3Q86VH5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
LRRTM3Q86VH5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRRTM3Q86VH5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRTM3Q86VH5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRTM3Q86VH5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LRRTM3Q86VH5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LRRTM3Q86VH5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LRRTM3Q86VH5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.02■■□□□ 1.28
LRRTM3Q86VH5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRTM3Q86VH5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.02■■□□□ 1.28
LRRTM3Q86VH5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
LRRTM3Q86VH5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LRRTM3Q86VH5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM3Q86VH5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM3Q86VH5 AC079089.2-201ENST00000531211 1277 ntBASIC23.01■■□□□ 1.27
LRRTM3Q86VH5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.01■■□□□ 1.27
LRRTM3Q86VH5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
LRRTM3Q86VH5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.01■■□□□ 1.27
LRRTM3Q86VH5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.01■■□□□ 1.27
LRRTM3Q86VH5 DUSP8P5-201ENST00000422884 1815 ntBASIC23.01■■□□□ 1.27
LRRTM3Q86VH5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LRRTM3Q86VH5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23■■□□□ 1.27
LRRTM3Q86VH5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRTM3Q86VH5 AC087742.1-201ENST00000575880 1738 ntBASIC23■■□□□ 1.27
LRRTM3Q86VH5 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LRRTM3Q86VH5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23■■□□□ 1.27
LRRTM3Q86VH5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23■■□□□ 1.27
LRRTM3Q86VH5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
LRRTM3Q86VH5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23■■□□□ 1.27
LRRTM3Q86VH5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23■■□□□ 1.27
LRRTM3Q86VH5 AC092437.1-201ENST00000624794 1048 ntBASIC23■■□□□ 1.27
LRRTM3Q86VH5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23■■□□□ 1.27
LRRTM3Q86VH5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23■■□□□ 1.27
LRRTM3Q86VH5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
LRRTM3Q86VH5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRTM3Q86VH5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRTM3Q86VH5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LRRTM3Q86VH5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LRRTM3Q86VH5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.99■■□□□ 1.27
LRRTM3Q86VH5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.98■■□□□ 1.27
LRRTM3Q86VH5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.98■■□□□ 1.27
LRRTM3Q86VH5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRTM3Q86VH5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRRTM3Q86VH5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
LRRTM3Q86VH5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LRRTM3Q86VH5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LRRTM3Q86VH5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.97■■□□□ 1.27
LRRTM3Q86VH5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
LRRTM3Q86VH5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRTM3Q86VH5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LRRTM3Q86VH5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LRRTM3Q86VH5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.97■■□□□ 1.27
LRRTM3Q86VH5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRTM3Q86VH5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRTM3Q86VH5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRTM3Q86VH5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRTM3Q86VH5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.96■■□□□ 1.27
LRRTM3Q86VH5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRTM3Q86VH5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.96■■□□□ 1.27
LRRTM3Q86VH5 C9orf163-202ENST00000624034 2573 ntBASIC22.96■■□□□ 1.27
LRRTM3Q86VH5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LRRTM3Q86VH5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LRRTM3Q86VH5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.96■■□□□ 1.27
LRRTM3Q86VH5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms