Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 AC231657.2-201ENST00000624556 255 ntBASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VPS13BQ7Z7G8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VPS13BQ7Z7G8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VPS13BQ7Z7G8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VPS13BQ7Z7G8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 LINC01124-201ENST00000409786 2117 ntBASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VPS13BQ7Z7G8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VPS13BQ7Z7G8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.57□□□□□ -0.24
VPS13BQ7Z7G8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VPS13BQ7Z7G8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
VPS13BQ7Z7G8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS13BQ7Z7G8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
VPS13BQ7Z7G8 AC005181.1-201ENST00000604782 1256 ntBASIC13.57□□□□□ -0.24
VPS13BQ7Z7G8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VPS13BQ7Z7G8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VPS13BQ7Z7G8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC13.57□□□□□ -0.24
VPS13BQ7Z7G8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
VPS13BQ7Z7G8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 AL353803.4-201ENST00000565882 1934 ntBASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 CNN2P6-201ENST00000439038 900 ntBASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 AC004687.1-201ENST00000579003 1625 ntBASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VPS13BQ7Z7G8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 LINC01529-204ENST00000636474 1715 ntBASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 FP325331.1-202ENST00000623531 1380 ntBASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 SLC29A4P1-201ENST00000398760 971 ntBASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 AC083906.2-201ENST00000511578 360 ntBASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.55□□□□□ -0.24
VPS13BQ7Z7G8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 AC007322.1-201ENST00000426983 750 ntBASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VPS13BQ7Z7G8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms