Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.25□□□□□ -0.13
SCXQ7RTU7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC14.25□□□□□ -0.13
SCXQ7RTU7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
SCXQ7RTU7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SCXQ7RTU7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SCXQ7RTU7 EP400NL-214ENST00000641289 2402 ntBASIC14.24□□□□□ -0.13
SCXQ7RTU7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCXQ7RTU7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCXQ7RTU7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCXQ7RTU7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SCXQ7RTU7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.24□□□□□ -0.13
SCXQ7RTU7 AC097381.1-201ENST00000429019 1296 ntBASIC14.24□□□□□ -0.13
SCXQ7RTU7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.24□□□□□ -0.13
SCXQ7RTU7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.24□□□□□ -0.13
SCXQ7RTU7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.24□□□□□ -0.13
SCXQ7RTU7 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.24□□□□□ -0.13
SCXQ7RTU7 AC141586.4-201ENST00000624558 1573 ntBASIC14.24□□□□□ -0.13
SCXQ7RTU7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCXQ7RTU7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC14.24□□□□□ -0.13
SCXQ7RTU7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SCXQ7RTU7 EED-207ENST00000528180 1745 ntTSL 5 BASIC14.24□□□□□ -0.13
SCXQ7RTU7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SCXQ7RTU7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 AC126544.1-201ENST00000580842 1059 ntBASIC14.23□□□□□ -0.13
SCXQ7RTU7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SCXQ7RTU7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.23□□□□□ -0.13
SCXQ7RTU7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SCXQ7RTU7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SCXQ7RTU7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.23□□□□□ -0.13
SCXQ7RTU7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCXQ7RTU7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC14.23□□□□□ -0.13
SCXQ7RTU7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCXQ7RTU7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCXQ7RTU7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCXQ7RTU7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.22□□□□□ -0.13
SCXQ7RTU7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.22□□□□□ -0.13
SCXQ7RTU7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SCXQ7RTU7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.22□□□□□ -0.13
SCXQ7RTU7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCXQ7RTU7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.22□□□□□ -0.13
SCXQ7RTU7 AC087623.3-201ENST00000607047 1098 ntBASIC14.22□□□□□ -0.13
SCXQ7RTU7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.22□□□□□ -0.13
SCXQ7RTU7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCXQ7RTU7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SCXQ7RTU7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCXQ7RTU7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCXQ7RTU7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCXQ7RTU7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCXQ7RTU7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.22□□□□□ -0.13
SCXQ7RTU7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SCXQ7RTU7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SCXQ7RTU7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.21□□□□□ -0.13
SCXQ7RTU7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SCXQ7RTU7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC14.21□□□□□ -0.13
SCXQ7RTU7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.21□□□□□ -0.13
SCXQ7RTU7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SCXQ7RTU7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SCXQ7RTU7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.21□□□□□ -0.13
SCXQ7RTU7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SCXQ7RTU7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.21□□□□□ -0.13
SCXQ7RTU7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SCXQ7RTU7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SCXQ7RTU7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.21□□□□□ -0.14
SCXQ7RTU7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCXQ7RTU7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.2□□□□□ -0.14
SCXQ7RTU7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCXQ7RTU7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCXQ7RTU7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCXQ7RTU7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.2□□□□□ -0.14
SCXQ7RTU7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.2□□□□□ -0.14
SCXQ7RTU7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.2□□□□□ -0.14
SCXQ7RTU7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.2□□□□□ -0.14
SCXQ7RTU7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.2□□□□□ -0.14
SCXQ7RTU7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC14.2□□□□□ -0.14
SCXQ7RTU7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCXQ7RTU7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCXQ7RTU7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SCXQ7RTU7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SCXQ7RTU7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCXQ7RTU7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCXQ7RTU7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCXQ7RTU7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SCXQ7RTU7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SCXQ7RTU7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SCXQ7RTU7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.2□□□□□ -0.14
SCXQ7RTU7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SCXQ7RTU7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC14.19□□□□□ -0.14
SCXQ7RTU7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms