Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.58■□□□□ 0.73
SHFQ7M4L6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SHFQ7M4L6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SHFQ7M4L6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SHFQ7M4L6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHFQ7M4L6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHFQ7M4L6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.58■□□□□ 0.72
SHFQ7M4L6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.58■□□□□ 0.72
SHFQ7M4L6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHFQ7M4L6 KRT125P-201ENST00000546827 989 ntBASIC19.58■□□□□ 0.72
SHFQ7M4L6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.58■□□□□ 0.72
SHFQ7M4L6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.58■□□□□ 0.72
SHFQ7M4L6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHFQ7M4L6 SLC25A24-204ENST00000569674 2357 ntBASIC19.58■□□□□ 0.72
SHFQ7M4L6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHFQ7M4L6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHFQ7M4L6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHFQ7M4L6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SHFQ7M4L6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SHFQ7M4L6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SHFQ7M4L6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHFQ7M4L6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.57■□□□□ 0.72
SHFQ7M4L6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHFQ7M4L6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHFQ7M4L6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SHFQ7M4L6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHFQ7M4L6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHFQ7M4L6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SHFQ7M4L6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHFQ7M4L6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SHFQ7M4L6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SHFQ7M4L6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHFQ7M4L6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.56■□□□□ 0.72
SHFQ7M4L6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHFQ7M4L6 Z92544.1-202ENST00000571933 1220 ntBASIC19.56■□□□□ 0.72
SHFQ7M4L6 AC092028.1-203ENST00000608262 953 ntBASIC19.56■□□□□ 0.72
SHFQ7M4L6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHFQ7M4L6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHFQ7M4L6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.56■□□□□ 0.72
SHFQ7M4L6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHFQ7M4L6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHFQ7M4L6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHFQ7M4L6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHFQ7M4L6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.55■□□□□ 0.72
SHFQ7M4L6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHFQ7M4L6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHFQ7M4L6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SHFQ7M4L6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHFQ7M4L6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHFQ7M4L6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHFQ7M4L6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
SHFQ7M4L6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.55■□□□□ 0.72
SHFQ7M4L6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SHFQ7M4L6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.55■□□□□ 0.72
SHFQ7M4L6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SHFQ7M4L6 AC009086.3-201ENST00000623486 1008 ntBASIC19.55■□□□□ 0.72
SHFQ7M4L6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.55■□□□□ 0.72
SHFQ7M4L6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
SHFQ7M4L6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHFQ7M4L6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHFQ7M4L6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHFQ7M4L6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.55■□□□□ 0.72
SHFQ7M4L6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 DUX4L4-201ENST00000566884 1269 ntBASIC19.54■□□□□ 0.72
SHFQ7M4L6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHFQ7M4L6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SHFQ7M4L6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms