Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.73■□□□□ 0.43
TREML4Q6UXN2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 AC004911.1-201ENST00000416316 871 ntBASIC17.72■□□□□ 0.43
TREML4Q6UXN2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 AC099791.2-201ENST00000605725 427 ntBASIC17.72■□□□□ 0.43
TREML4Q6UXN2 AC092437.1-201ENST00000624794 1048 ntBASIC17.72■□□□□ 0.43
TREML4Q6UXN2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 AC079630.1-202ENST00000618127 1840 ntBASIC17.72■□□□□ 0.43
TREML4Q6UXN2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.72■□□□□ 0.43
TREML4Q6UXN2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREML4Q6UXN2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TREML4Q6UXN2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.71■□□□□ 0.42
TREML4Q6UXN2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TREML4Q6UXN2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.7■□□□□ 0.42
TREML4Q6UXN2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TREML4Q6UXN2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.68■□□□□ 0.42
TREML4Q6UXN2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 YBX1P1-201ENST00000445822 960 ntBASIC17.68■□□□□ 0.42
TREML4Q6UXN2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.68■□□□□ 0.42
TREML4Q6UXN2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms