Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF213Q63HN8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF213Q63HN8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 AC091874.3-201ENST00000512672 1195 ntBASIC11.85□□□□□ -0.51
RNF213Q63HN8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF213Q63HN8 AC141586.4-201ENST00000624558 1573 ntBASIC11.85□□□□□ -0.51
RNF213Q63HN8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF213Q63HN8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF213Q63HN8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF213Q63HN8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF213Q63HN8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF213Q63HN8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF213Q63HN8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF213Q63HN8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF213Q63HN8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 AC233263.1-201ENST00000578059 224 ntBASIC11.84□□□□□ -0.51
RNF213Q63HN8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RNF213Q63HN8 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF213Q63HN8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF213Q63HN8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF213Q63HN8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.84□□□□□ -0.51
RNF213Q63HN8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC11.84□□□□□ -0.51
RNF213Q63HN8 CYP2T3P-201ENST00000601990 817 ntBASIC11.84□□□□□ -0.51
RNF213Q63HN8 FAM197Y4-202ENST00000622692 608 ntBASIC11.84□□□□□ -0.51
RNF213Q63HN8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RNF213Q63HN8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
RNF213Q63HN8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.83□□□□□ -0.51
RNF213Q63HN8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC11.83□□□□□ -0.51
RNF213Q63HN8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC11.83□□□□□ -0.52
RNF213Q63HN8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC11.83□□□□□ -0.52
RNF213Q63HN8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC11.83□□□□□ -0.52
RNF213Q63HN8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF213Q63HN8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF213Q63HN8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF213Q63HN8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF213Q63HN8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC11.83□□□□□ -0.52
RNF213Q63HN8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
RNF213Q63HN8 AC010536.3-201ENST00000620306 533 ntBASIC11.83□□□□□ -0.52
RNF213Q63HN8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF213Q63HN8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RNF213Q63HN8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC11.83□□□□□ -0.52
RNF213Q63HN8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC11.83□□□□□ -0.52
RNF213Q63HN8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.83□□□□□ -0.52
RNF213Q63HN8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RNF213Q63HN8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC11.83□□□□□ -0.52
RNF213Q63HN8 GPALPP1-207ENST00000611650 899 ntBASIC11.83□□□□□ -0.52
RNF213Q63HN8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF213Q63HN8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF213Q63HN8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF213Q63HN8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF213Q63HN8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF213Q63HN8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF213Q63HN8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF213Q63HN8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF213Q63HN8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 AC097658.1-201ENST00000475555 843 ntBASIC11.82□□□□□ -0.52
RNF213Q63HN8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF213Q63HN8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RNF213Q63HN8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RNF213Q63HN8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.82□□□□□ -0.52
RNF213Q63HN8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RNF213Q63HN8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF213Q63HN8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC11.81□□□□□ -0.52
RNF213Q63HN8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC11.81□□□□□ -0.52
RNF213Q63HN8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC11.81□□□□□ -0.52
RNF213Q63HN8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.81□□□□□ -0.52
RNF213Q63HN8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RNF213Q63HN8 AC068338.2-201ENST00000563278 1430 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms