Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC39.03■■■■□ 3.84
HMGXB3Q12766 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC39.03■■■■□ 3.84
HMGXB3Q12766 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC39.03■■■■□ 3.84
HMGXB3Q12766 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC39.03■■■■□ 3.84
HMGXB3Q12766 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
HMGXB3Q12766 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
HMGXB3Q12766 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
HMGXB3Q12766 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC39.02■■■■□ 3.84
HMGXB3Q12766 AC007322.4-201ENST00000509611 723 ntBASIC39.02■■■■□ 3.84
HMGXB3Q12766 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC39.02■■■■□ 3.84
HMGXB3Q12766 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
HMGXB3Q12766 AC092118.2-201ENST00000613495 667 ntBASIC39.02■■■■□ 3.84
HMGXB3Q12766 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC39.02■■■■□ 3.84
HMGXB3Q12766 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC39.02■■■■□ 3.84
HMGXB3Q12766 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC39.01■■■■□ 3.84
HMGXB3Q12766 ADM-205ENST00000528544 586 ntTSL 2 BASIC39.01■■■■□ 3.84
HMGXB3Q12766 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC39■■■■□ 3.83
HMGXB3Q12766 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC39■■■■□ 3.83
HMGXB3Q12766 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC39■■■■□ 3.83
HMGXB3Q12766 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
HMGXB3Q12766 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC38.99■■■■□ 3.83
HMGXB3Q12766 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC38.99■■■■□ 3.83
HMGXB3Q12766 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC38.99■■■■□ 3.83
HMGXB3Q12766 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC38.99■■■■□ 3.83
HMGXB3Q12766 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
HMGXB3Q12766 KRT18P20-201ENST00000548986 1279 ntBASIC38.99■■■■□ 3.83
HMGXB3Q12766 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC38.99■■■■□ 3.83
HMGXB3Q12766 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
HMGXB3Q12766 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC38.98■■■■□ 3.83
HMGXB3Q12766 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC38.98■■■■□ 3.83
HMGXB3Q12766 MYC-209ENST00000641252 345 ntBASIC38.98■■■■□ 3.83
HMGXB3Q12766 AC079630.1-202ENST00000618127 1840 ntBASIC38.98■■■■□ 3.83
HMGXB3Q12766 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC38.97■■■■□ 3.83
HMGXB3Q12766 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC38.97■■■■□ 3.83
HMGXB3Q12766 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC38.97■■■■□ 3.83
HMGXB3Q12766 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
HMGXB3Q12766 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
HMGXB3Q12766 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC38.97■■■■□ 3.83
HMGXB3Q12766 AP003733.4-201ENST00000623785 1697 ntBASIC38.96■■■■□ 3.83
HMGXB3Q12766 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC38.96■■■■□ 3.83
HMGXB3Q12766 MIPEPP3-201ENST00000412105 444 ntBASIC38.96■■■■□ 3.83
HMGXB3Q12766 DUSP5P2-201ENST00000426873 1033 ntBASIC38.96■■■■□ 3.83
HMGXB3Q12766 SERP1-208ENST00000491660 830 ntTSL 2 BASIC38.96■■■■□ 3.83
HMGXB3Q12766 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC38.96■■■■□ 3.83
HMGXB3Q12766 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
HMGXB3Q12766 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
HMGXB3Q12766 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC38.95■■■■□ 3.83
HMGXB3Q12766 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
HMGXB3Q12766 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC38.94■■■■□ 3.82
HMGXB3Q12766 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC38.94■■■■□ 3.82
HMGXB3Q12766 AC138907.5-202ENST00000569484 235 ntBASIC38.94■■■■□ 3.82
HMGXB3Q12766 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC38.94■■■■□ 3.82
HMGXB3Q12766 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC38.94■■■■□ 3.82
HMGXB3Q12766 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
HMGXB3Q12766 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
HMGXB3Q12766 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC38.94■■■■□ 3.82
HMGXB3Q12766 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC38.93■■■■□ 3.82
HMGXB3Q12766 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC38.93■■■■□ 3.82
HMGXB3Q12766 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
HMGXB3Q12766 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC38.92■■■■□ 3.82
HMGXB3Q12766 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC38.92■■■■□ 3.82
HMGXB3Q12766 MKRN4P-201ENST00000444706 1521 ntBASIC38.92■■■■□ 3.82
HMGXB3Q12766 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
HMGXB3Q12766 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC38.92■■■■□ 3.82
HMGXB3Q12766 PHB2-213ENST00000546111 858 ntTSL 2 BASIC38.92■■■■□ 3.82
HMGXB3Q12766 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC38.92■■■■□ 3.82
HMGXB3Q12766 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC38.92■■■■□ 3.82
HMGXB3Q12766 AC068338.2-201ENST00000563278 1430 ntBASIC38.91■■■■□ 3.82
HMGXB3Q12766 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC38.91■■■■□ 3.82
HMGXB3Q12766 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
HMGXB3Q12766 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC38.91■■■■□ 3.82
HMGXB3Q12766 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
HMGXB3Q12766 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
HMGXB3Q12766 AC055733.4-201ENST00000638462 1354 ntBASIC38.9■■■■□ 3.82
HMGXB3Q12766 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
HMGXB3Q12766 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
HMGXB3Q12766 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC38.9■■■■□ 3.82
HMGXB3Q12766 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC38.9■■■■□ 3.82
HMGXB3Q12766 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
HMGXB3Q12766 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
HMGXB3Q12766 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC38.89■■■■□ 3.82
HMGXB3Q12766 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
HMGXB3Q12766 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC38.89■■■■□ 3.82
HMGXB3Q12766 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC38.89■■■■□ 3.82
HMGXB3Q12766 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC38.89■■■■□ 3.82
HMGXB3Q12766 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
HMGXB3Q12766 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC38.89■■■■□ 3.82
HMGXB3Q12766 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC38.88■■■■□ 3.82
HMGXB3Q12766 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
HMGXB3Q12766 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC38.88■■■■□ 3.81
HMGXB3Q12766 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC38.88■■■■□ 3.81
HMGXB3Q12766 AL596275.1-201ENST00000423464 877 ntBASIC38.88■■■■□ 3.81
HMGXB3Q12766 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
HMGXB3Q12766 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC38.87■■■■□ 3.81
HMGXB3Q12766 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC38.87■■■■□ 3.81
HMGXB3Q12766 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
HMGXB3Q12766 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
HMGXB3Q12766 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
HMGXB3Q12766 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC38.87■■■■□ 3.81
HMGXB3Q12766 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC38.87■■■■□ 3.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms