Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.74■□□□□ 0.75
PUDPQ08623 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PUDPQ08623 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PUDPQ08623 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PUDPQ08623 LINC01960-201ENST00000563759 1884 ntBASIC19.73■□□□□ 0.75
PUDPQ08623 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PUDPQ08623 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PUDPQ08623 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PUDPQ08623 AC127496.7-201ENST00000625110 1798 ntBASIC19.73■□□□□ 0.75
PUDPQ08623 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PUDPQ08623 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.73■□□□□ 0.75
PUDPQ08623 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PUDPQ08623 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.73■□□□□ 0.75
PUDPQ08623 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PUDPQ08623 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.73■□□□□ 0.75
PUDPQ08623 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PUDPQ08623 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.73■□□□□ 0.75
PUDPQ08623 pRNA.6-201ENST00000610482 90 ntBASIC19.73■□□□□ 0.75
PUDPQ08623 pRNA.5-201ENST00000612139 90 ntBASIC19.73■□□□□ 0.75
PUDPQ08623 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.73■□□□□ 0.75
PUDPQ08623 pRNA.11-201ENST00000618423 90 ntBASIC19.73■□□□□ 0.75
PUDPQ08623 pRNA.13-201ENST00000619112 90 ntBASIC19.73■□□□□ 0.75
PUDPQ08623 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.73■□□□□ 0.75
PUDPQ08623 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.73■□□□□ 0.75
PUDPQ08623 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.73■□□□□ 0.75
PUDPQ08623 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PUDPQ08623 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PUDPQ08623 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PUDPQ08623 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PUDPQ08623 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PUDPQ08623 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PUDPQ08623 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.72■□□□□ 0.75
PUDPQ08623 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PUDPQ08623 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PUDPQ08623 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PUDPQ08623 AC087742.1-201ENST00000575880 1738 ntBASIC19.72■□□□□ 0.75
PUDPQ08623 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.72■□□□□ 0.75
PUDPQ08623 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PUDPQ08623 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PUDPQ08623 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.72■□□□□ 0.75
PUDPQ08623 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PUDPQ08623 AC133637.1-201ENST00000624115 1537 ntBASIC19.71■□□□□ 0.75
PUDPQ08623 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PUDPQ08623 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PUDPQ08623 AC131281.2-201ENST00000520478 145 ntBASIC19.71■□□□□ 0.75
PUDPQ08623 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PUDPQ08623 MIR4466-201ENST00000606121 54 ntBASIC19.71■□□□□ 0.75
PUDPQ08623 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.71■□□□□ 0.75
PUDPQ08623 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.71■□□□□ 0.75
PUDPQ08623 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.71■□□□□ 0.75
PUDPQ08623 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PUDPQ08623 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.71■□□□□ 0.75
PUDPQ08623 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
PUDPQ08623 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PUDPQ08623 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PUDPQ08623 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PUDPQ08623 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PUDPQ08623 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PUDPQ08623 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PUDPQ08623 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PUDPQ08623 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PUDPQ08623 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PUDPQ08623 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PUDPQ08623 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PUDPQ08623 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PUDPQ08623 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.69■□□□□ 0.74
PUDPQ08623 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PUDPQ08623 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PUDPQ08623 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PUDPQ08623 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PUDPQ08623 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PUDPQ08623 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
PUDPQ08623 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.69■□□□□ 0.74
PUDPQ08623 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PUDPQ08623 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PUDPQ08623 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.68■□□□□ 0.74
PUDPQ08623 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 AC242852.2-201ENST00000615738 1807 ntBASIC19.68■□□□□ 0.74
PUDPQ08623 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.68■□□□□ 0.74
PUDPQ08623 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.68■□□□□ 0.74
PUDPQ08623 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.68■□□□□ 0.74
PUDPQ08623 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 MIR3181-201ENST00000578512 73 ntBASIC19.68■□□□□ 0.74
PUDPQ08623 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.68■□□□□ 0.74
PUDPQ08623 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.68■□□□□ 0.74
PUDPQ08623 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PUDPQ08623 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PUDPQ08623 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PUDPQ08623 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PUDPQ08623 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PUDPQ08623 AC131212.1-201ENST00000613771 668 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms