Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 ACP1YKL192C 378 nt2.34□□□□□ -2.03
LSM6Q06406 STP2YHR006W 1626 nt2.34□□□□□ -2.04
LSM6Q06406 MAL13YGR288W 1422 nt2.34□□□□□ -2.04
LSM6Q06406 UBP10YNL186W 2379 nt2.34□□□□□ -2.04
LSM6Q06406 SOF1YLL011W 1470 nt2.33□□□□□ -2.04
LSM6Q06406 AIP1YMR092C 1848 nt2.33□□□□□ -2.04
LSM6Q06406 SMI1YGR229C 1518 nt2.33□□□□□ -2.04
LSM6Q06406 NDT80YHR124W 1884 nt2.33□□□□□ -2.04
LSM6Q06406 FMP48YGR052W 1110 nt2.33□□□□□ -2.04
LSM6Q06406 YHR140WYHR140W 720 nt2.33□□□□□ -2.04
LSM6Q06406 YPR077CYPR077C 372 nt2.33□□□□□ -2.04
LSM6Q06406 GGA1YDR358W 1674 nt2.33□□□□□ -2.04
LSM6Q06406 BPT1YLL015W 4680 nt2.33□□□□□ -2.04
LSM6Q06406 PCI8YIL071C 1335 nt2.33□□□□□ -2.04
LSM6Q06406 CEX1YOR112W 2286 nt2.33□□□□□ -2.04
LSM6Q06406 FLO1YAR050W 4614 nt2.32□□□□□ -2.04
LSM6Q06406 APA2YDR530C 978 nt2.32□□□□□ -2.04
LSM6Q06406 RNA1YMR235C 1224 nt2.32□□□□□ -2.04
LSM6Q06406 SAF1YBR280C 1914 nt2.32□□□□□ -2.04
LSM6Q06406 BDP1YNL039W 1785 nt2.31□□□□□ -2.04
LSM6Q06406 JJJ1YNL227C 1773 nt2.31□□□□□ -2.04
LSM6Q06406 FUN30YAL019W 3396 nt2.31□□□□□ -2.04
LSM6Q06406 JEN1YKL217W 1851 nt2.31□□□□□ -2.04
LSM6Q06406 YHR214C-DYHR214C-D 294 nt2.31□□□□□ -2.04
LSM6Q06406 MBR1YKL093W 1020 nt2.31□□□□□ -2.04
LSM6Q06406 RPC37YKR025W 849 nt2.31□□□□□ -2.04
LSM6Q06406 YLR154C-HYLR154C-H 132 nt2.31□□□□□ -2.04
LSM6Q06406 YLR156C-AYLR156C-A 132 nt2.31□□□□□ -2.04
LSM6Q06406 YLR157C-CYLR157C-C 132 nt2.31□□□□□ -2.04
LSM6Q06406 YLR159C-AYLR159C-A 132 nt2.31□□□□□ -2.04
LSM6Q06406 YAR069CYAR069C 294 nt2.31□□□□□ -2.04
LSM6Q06406 SFH1YLR321C 1281 nt2.31□□□□□ -2.04
LSM6Q06406 OSW5YMR148W 447 nt2.31□□□□□ -2.04
LSM6Q06406 BSD2YBR290W 966 nt2.31□□□□□ -2.04
LSM6Q06406 YRB30YGL164C 1323 nt2.31□□□□□ -2.04
LSM6Q06406 ATG13YPR185W 2217 nt2.31□□□□□ -2.04
LSM6Q06406 YFL040WYFL040W 1623 nt2.31□□□□□ -2.04
LSM6Q06406 TMA108YIL137C 2841 nt2.31□□□□□ -2.04
LSM6Q06406 TIF4631YGR162W 2859 nt2.31□□□□□ -2.04
LSM6Q06406 SEC7YDR170C 6030 nt2.3□□□□□ -2.04
LSM6Q06406 DNM1YLL001W 2274 nt2.3□□□□□ -2.04
LSM6Q06406 PMR1YGL167C 2853 nt2.3□□□□□ -2.04
LSM6Q06406 TFC4YGR047C 3078 nt2.3□□□□□ -2.04
LSM6Q06406 YDL162CYDL162C 357 nt2.3□□□□□ -2.04
LSM6Q06406 YFT2YDR319C 825 nt2.3□□□□□ -2.04
LSM6Q06406 YHI9YHR029C 885 nt2.3□□□□□ -2.04
LSM6Q06406 RPS21BYJL136C 264 nt2.3□□□□□ -2.04
LSM6Q06406 GCD7YLR291C 1146 nt2.3□□□□□ -2.04
LSM6Q06406 RPC19YNL113W 429 nt2.3□□□□□ -2.04
LSM6Q06406 MRPL37YBR268W 318 nt2.3□□□□□ -2.04
LSM6Q06406 COM2YER130C 1332 nt2.3□□□□□ -2.04
LSM6Q06406 YLR278CYLR278C 4026 nt2.3□□□□□ -2.04
LSM6Q06406 PRP8YHR165C 7242 nt2.3□□□□□ -2.04
LSM6Q06406 ECM29YHL030W 5607 nt2.3□□□□□ -2.04
LSM6Q06406 ALE1YOR175C 1860 nt2.3□□□□□ -2.04
LSM6Q06406 WHI4YDL224C 1950 nt2.3□□□□□ -2.04
LSM6Q06406 LAP2YNL045W 2016 nt2.3□□□□□ -2.04
LSM6Q06406 ESL1YIL151C 3357 nt2.3□□□□□ -2.04
LSM6Q06406 ITC1YGL133W 3795 nt2.3□□□□□ -2.04
LSM6Q06406 GPB1YOR371C 2694 nt2.29□□□□□ -2.04
LSM6Q06406 GCD6YDR211W 2139 nt2.29□□□□□ -2.04
LSM6Q06406 YEL032C-AYEL032C-A 162 nt2.29□□□□□ -2.04
LSM6Q06406 PNC1YGL037C 651 nt2.29□□□□□ -2.04
LSM6Q06406 POG1YIL122W 1056 nt2.29□□□□□ -2.04
LSM6Q06406 COX19YLL018C-A 297 nt2.29□□□□□ -2.04
LSM6Q06406 YMR141CYMR141C 309 nt2.29□□□□□ -2.04
LSM6Q06406 GOT1YMR292W 417 nt2.29□□□□□ -2.04
LSM6Q06406 PRX1YBL064C 786 nt2.29□□□□□ -2.04
LSM6Q06406 SSU72YNL222W 621 nt2.29□□□□□ -2.04
LSM6Q06406 MCK1YNL307C 1128 nt2.29□□□□□ -2.04
LSM6Q06406 DDI3YNL335W 678 nt2.29□□□□□ -2.04
LSM6Q06406 YOR238WYOR238W 912 nt2.29□□□□□ -2.04
LSM6Q06406 CAF130YGR134W 3369 nt2.29□□□□□ -2.04
LSM6Q06406 PDR12YPL058C 4536 nt2.29□□□□□ -2.04
LSM6Q06406 RRN7YJL025W 1545 nt2.28□□□□□ -2.04
LSM6Q06406 NPL6YMR091C 1308 nt2.28□□□□□ -2.04
LSM6Q06406 RAD2YGR258C 3096 nt2.28□□□□□ -2.04
LSM6Q06406 YDR149CYDR149C 708 nt2.28□□□□□ -2.04
LSM6Q06406 PEX10YDR265W 1014 nt2.28□□□□□ -2.04
LSM6Q06406 YGR011WYGR011W 327 nt2.28□□□□□ -2.04
LSM6Q06406 GRE3YHR104W 984 nt2.28□□□□□ -2.04
LSM6Q06406 LSM1YJL124C 519 nt2.28□□□□□ -2.04
LSM6Q06406 YNK1YKL067W 462 nt2.28□□□□□ -2.04
LSM6Q06406 CPR8YNR028W 927 nt2.28□□□□□ -2.04
LSM6Q06406 YNR071CYNR071C 1029 nt2.28□□□□□ -2.04
LSM6Q06406 PLP2YOR281C 861 nt2.28□□□□□ -2.04
LSM6Q06406 YPL107WYPL107W 747 nt2.28□□□□□ -2.04
LSM6Q06406 YPR150WYPR150W 522 nt2.28□□□□□ -2.04
LSM6Q06406 IME4YGL192W 1803 nt2.28□□□□□ -2.04
LSM6Q06406 ARX1YDR101C 1782 nt2.28□□□□□ -2.04
LSM6Q06406 VPS17YOR132W 1656 nt2.28□□□□□ -2.05
LSM6Q06406 MUP3YHL036W 1641 nt2.28□□□□□ -2.05
LSM6Q06406 ERG11YHR007C 1593 nt2.27□□□□□ -2.05
LSM6Q06406 TEC1YBR083W 1461 nt2.27□□□□□ -2.05
LSM6Q06406 RAD5YLR032W 3510 nt2.27□□□□□ -2.05
LSM6Q06406 CDC20YGL116W 1833 nt2.27□□□□□ -2.05
LSM6Q06406 CEP3YMR168C 1827 nt2.27□□□□□ -2.05
LSM6Q06406 YER085CYER085C 522 nt2.27□□□□□ -2.05
LSM6Q06406 YHR086W-AYHR086W-A 162 nt2.27□□□□□ -2.05
LSM6Q06406 YLR230WYLR230W 306 nt2.27□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms