Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 PNT1YOR266W 1272 nt3.9□□□□□ -1.79
RPN9Q04062 FSH3YOR280C 801 nt3.9□□□□□ -1.79
RPN9Q04062 GDT1YBR187W 843 nt3.9□□□□□ -1.79
RPN9Q04062 STP22YCL008C 1158 nt3.9□□□□□ -1.79
RPN9Q04062 CLN2YPL256C 1638 nt3.9□□□□□ -1.79
RPN9Q04062 YBR225WYBR225W 2703 nt3.9□□□□□ -1.79
RPN9Q04062 MNR2YKL064W 2910 nt3.9□□□□□ -1.79
RPN9Q04062 GPI10YGL142C 1851 nt3.9□□□□□ -1.79
RPN9Q04062 YNR065CYNR065C 3351 nt3.89□□□□□ -1.79
RPN9Q04062 NHX1YDR456W 1902 nt3.89□□□□□ -1.79
RPN9Q04062 FMP25YLR077W 1752 nt3.89□□□□□ -1.79
RPN9Q04062 YGL088WYGL088W 366 nt3.89□□□□□ -1.79
RPN9Q04062 YKL162C-AYKL162C-A 153 nt3.89□□□□□ -1.79
RPN9Q04062 YNL144W-AYNL144W-A 84 nt3.89□□□□□ -1.79
RPN9Q04062 KRE5YOR336W 4098 nt3.89□□□□□ -1.79
RPN9Q04062 GEM1YAL048C 1989 nt3.89□□□□□ -1.79
RPN9Q04062 PMS1YNL082W 2622 nt3.89□□□□□ -1.79
RPN9Q04062 NTA1YJR062C 1374 nt3.89□□□□□ -1.79
RPN9Q04062 VPS27YNR006W 1869 nt3.88□□□□□ -1.79
RPN9Q04062 NCR1YPL006W 3513 nt3.88□□□□□ -1.79
RPN9Q04062 CWH43YCR017C 2862 nt3.88□□□□□ -1.79
RPN9Q04062 YDR290WYDR290W 330 nt3.88□□□□□ -1.79
RPN9Q04062 MPC1YGL080W 393 nt3.88□□□□□ -1.79
RPN9Q04062 CDC12YHR107C 1224 nt3.88□□□□□ -1.79
RPN9Q04062 TFA2YKR062W 987 nt3.88□□□□□ -1.79
RPN9Q04062 IES3YLR052W 753 nt3.88□□□□□ -1.79
RPN9Q04062 YOR338WYOR338W 1092 nt3.88□□□□□ -1.79
RPN9Q04062 RET3YPL010W 570 nt3.88□□□□□ -1.79
RPN9Q04062 OPY1YBR129C 987 nt3.88□□□□□ -1.79
RPN9Q04062 CTK1YKL139W 1587 nt3.88□□□□□ -1.79
RPN9Q04062 YTM1YOR272W 1383 nt3.88□□□□□ -1.79
RPN9Q04062 PRS5YOL061W 1491 nt3.87□□□□□ -1.79
RPN9Q04062 RPB2YOR151C 3675 nt3.87□□□□□ -1.79
RPN9Q04062 SEG1YMR086W 2883 nt3.87□□□□□ -1.79
RPN9Q04062 RCR2YDR003W 633 nt3.87□□□□□ -1.79
RPN9Q04062 DDI2YFL061W 678 nt3.87□□□□□ -1.79
RPN9Q04062 YGL258W-AYGL258W-A 234 nt3.87□□□□□ -1.79
RPN9Q04062 ERV29YGR284C 933 nt3.87□□□□□ -1.79
RPN9Q04062 YIL025CYIL025C 375 nt3.87□□□□□ -1.79
RPN9Q04062 YLL047WYLL047W 384 nt3.87□□□□□ -1.79
RPN9Q04062 DDI3YNL335W 678 nt3.87□□□□□ -1.79
RPN9Q04062 TMC1YOR052C 453 nt3.87□□□□□ -1.79
RPN9Q04062 YOR186WYOR186W 435 nt3.87□□□□□ -1.79
RPN9Q04062 UAF30YOR295W 687 nt3.87□□□□□ -1.79
RPN9Q04062 TAF14YPL129W 735 nt3.87□□□□□ -1.79
RPN9Q04062 FUR1YHR128W 651 nt3.86□□□□□ -1.79
RPN9Q04062 EBP2YKL172W 1284 nt3.86□□□□□ -1.79
RPN9Q04062 YLR363W-AYLR363W-A 258 nt3.86□□□□□ -1.79
RPN9Q04062 TIF34YMR146C 1044 nt3.86□□□□□ -1.79
RPN9Q04062 RUF21RUF21 707 nt3.86□□□□□ -1.79
RPN9Q04062 RPL19AYBR084C-A 570 nt3.86□□□□□ -1.79
RPN9Q04062 TCB3YML072C 4638 nt3.86□□□□□ -1.79
RPN9Q04062 TRM1YDR120C 1713 nt3.86□□□□□ -1.79
RPN9Q04062 ABP140YOR239W 1887 nt3.86□□□□□ -1.79
RPN9Q04062 TAF8YML114C 1533 nt3.85□□□□□ -1.79
RPN9Q04062 MGR3YMR115W 1506 nt3.85□□□□□ -1.79
RPN9Q04062 TRE2YOR256C 2430 nt3.85□□□□□ -1.79
RPN9Q04062 GCD1YOR260W 1737 nt3.85□□□□□ -1.79
RPN9Q04062 YCR007CYCR007C 720 nt3.85□□□□□ -1.79
RPN9Q04062 SHU2YDR078C 672 nt3.85□□□□□ -1.79
RPN9Q04062 TOS8YGL096W 831 nt3.85□□□□□ -1.79
RPN9Q04062 BAT2YJR148W 1131 nt3.85□□□□□ -1.79
RPN9Q04062 YOL166CYOL166C 339 nt3.85□□□□□ -1.79
RPN9Q04062 USA1YML029W 2517 nt3.85□□□□□ -1.79
RPN9Q04062 ROD1YOR018W 2514 nt3.85□□□□□ -1.79
RPN9Q04062 PRP3YDR473C 1410 nt3.85□□□□□ -1.79
RPN9Q04062 MCD4YKL165C 2760 nt3.85□□□□□ -1.79
RPN9Q04062 RTS1YOR014W 2274 nt3.84□□□□□ -1.79
RPN9Q04062 YCR015CYCR015C 954 nt3.84□□□□□ -1.79
RPN9Q04062 CTH1YDR151C 978 nt3.84□□□□□ -1.79
RPN9Q04062 MSW1YDR268W 1140 nt3.84□□□□□ -1.79
RPN9Q04062 RPS18AYDR450W 441 nt3.84□□□□□ -1.79
RPN9Q04062 COX2Q0250 756 nt3.84□□□□□ -1.79
RPN9Q04062 IGO2YHR132W-A 396 nt3.84□□□□□ -1.79
RPN9Q04062 IMP3YHR148W 552 nt3.84□□□□□ -1.79
RPN9Q04062 PSY3YLR376C 729 nt3.84□□□□□ -1.79
RPN9Q04062 YMR178WYMR178W 825 nt3.84□□□□□ -1.79
RPN9Q04062 AAH1YNL141W 1044 nt3.84□□□□□ -1.79
RPN9Q04062 MDJ2YNL328C 441 nt3.84□□□□□ -1.79
RPN9Q04062 REX4YOL080C 870 nt3.84□□□□□ -1.79
RPN9Q04062 IDH2YOR136W 1110 nt3.84□□□□□ -1.79
RPN9Q04062 MUM2YBR057C 1101 nt3.84□□□□□ -1.79
RPN9Q04062 MEF1YLR069C 2286 nt3.84□□□□□ -1.79
RPN9Q04062 YCL076WYCL076W 744 nt3.83□□□□□ -1.8
RPN9Q04062 RPC11YDR045C 333 nt3.83□□□□□ -1.8
RPN9Q04062 HSP42YDR171W 1128 nt3.83□□□□□ -1.8
RPN9Q04062 YDR391CYDR391C 699 nt3.83□□□□□ -1.8
RPN9Q04062 YER034WYER034W 558 nt3.83□□□□□ -1.8
RPN9Q04062 YHR173CYHR173C 339 nt3.83□□□□□ -1.8
RPN9Q04062 MCM16YPR046W 546 nt3.83□□□□□ -1.8
RPN9Q04062 PPQ1YPL179W 1650 nt3.83□□□□□ -1.8
RPN9Q04062 AGA1YNR044W 2178 nt3.83□□□□□ -1.8
RPN9Q04062 DHR2YKL078W 2208 nt3.83□□□□□ -1.8
RPN9Q04062 POL1YNL102W 4407 nt3.82□□□□□ -1.8
RPN9Q04062 YKR015CYKR015C 1707 nt3.82□□□□□ -1.8
RPN9Q04062 YDR336WYDR336W 945 nt3.82□□□□□ -1.8
RPN9Q04062 KEG1YFR042W 603 nt3.82□□□□□ -1.8
RPN9Q04062 REE1YJL217W 597 nt3.82□□□□□ -1.8
RPN9Q04062 YJR096WYJR096W 849 nt3.82□□□□□ -1.8
RPN9Q04062 LAC1YKL008C 1257 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 55.9 ms