Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CFHR3Q02985 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17■□□□□ 0.31
CFHR3Q02985 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFHR3Q02985 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFHR3Q02985 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17■□□□□ 0.31
CFHR3Q02985 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17■□□□□ 0.31
CFHR3Q02985 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFHR3Q02985 YBX1P1-201ENST00000445822 960 ntBASIC17■□□□□ 0.31
CFHR3Q02985 AC079089.2-201ENST00000531211 1277 ntBASIC17■□□□□ 0.31
CFHR3Q02985 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFHR3Q02985 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CFHR3Q02985 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17■□□□□ 0.31
CFHR3Q02985 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17■□□□□ 0.31
CFHR3Q02985 MIR6084-201ENST00000622012 110 ntBASIC17■□□□□ 0.31
CFHR3Q02985 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17■□□□□ 0.31
CFHR3Q02985 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFHR3Q02985 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17■□□□□ 0.31
CFHR3Q02985 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CFHR3Q02985 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.99■□□□□ 0.31
CFHR3Q02985 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CFHR3Q02985 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CFHR3Q02985 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.99■□□□□ 0.31
CFHR3Q02985 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.99■□□□□ 0.31
CFHR3Q02985 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.99■□□□□ 0.31
CFHR3Q02985 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CFHR3Q02985 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CFHR3Q02985 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CFHR3Q02985 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.98■□□□□ 0.31
CFHR3Q02985 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CFHR3Q02985 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFHR3Q02985 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFHR3Q02985 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.98■□□□□ 0.31
CFHR3Q02985 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.98■□□□□ 0.31
CFHR3Q02985 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.98■□□□□ 0.31
CFHR3Q02985 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.98■□□□□ 0.31
CFHR3Q02985 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CFHR3Q02985 C9orf163-202ENST00000624034 2573 ntBASIC16.98■□□□□ 0.31
CFHR3Q02985 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFHR3Q02985 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CFHR3Q02985 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 ESRRAP2-201ENST00000418437 1549 ntBASIC16.97■□□□□ 0.31
CFHR3Q02985 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.97■□□□□ 0.31
CFHR3Q02985 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.97■□□□□ 0.31
CFHR3Q02985 AC123595.1-201ENST00000440769 1046 ntBASIC16.97■□□□□ 0.31
CFHR3Q02985 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 AC137767.1-201ENST00000602918 1920 ntBASIC16.97■□□□□ 0.31
CFHR3Q02985 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.97■□□□□ 0.31
CFHR3Q02985 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFHR3Q02985 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFHR3Q02985 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFHR3Q02985 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFHR3Q02985 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.96■□□□□ 0.31
CFHR3Q02985 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CFHR3Q02985 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.96■□□□□ 0.31
CFHR3Q02985 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CFHR3Q02985 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFHR3Q02985 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFHR3Q02985 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFHR3Q02985 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CFHR3Q02985 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CFHR3Q02985 C1orf229-201ENST00000623686 2258 ntBASIC16.95■□□□□ 0.3
CFHR3Q02985 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFHR3Q02985 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CFHR3Q02985 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFHR3Q02985 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFHR3Q02985 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CFHR3Q02985 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CFHR3Q02985 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.95■□□□□ 0.3
CFHR3Q02985 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CFHR3Q02985 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFHR3Q02985 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.95■□□□□ 0.3
CFHR3Q02985 TPRG1LP1-201ENST00000598702 760 ntBASIC16.95■□□□□ 0.3
CFHR3Q02985 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFHR3Q02985 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.95■□□□□ 0.3
CFHR3Q02985 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.95■□□□□ 0.3
CFHR3Q02985 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFHR3Q02985 LINC00526-201ENST00000581067 1875 ntBASIC16.95■□□□□ 0.3
CFHR3Q02985 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms