Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HIST1H1AQ02539 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 AC092053.2-201ENST00000640557 1818 ntBASIC16.54■□□□□ 0.24
HIST1H1AQ02539 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 FP325331.1-202ENST00000623531 1380 ntBASIC16.54■□□□□ 0.24
HIST1H1AQ02539 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 AC092667.1-201ENST00000434301 2586 ntBASIC16.54■□□□□ 0.24
HIST1H1AQ02539 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H1AQ02539 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HIST1H1AQ02539 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 AC009086.3-201ENST00000623486 1008 ntBASIC16.52■□□□□ 0.24
HIST1H1AQ02539 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
HIST1H1AQ02539 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H1AQ02539 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H1AQ02539 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H1AQ02539 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H1AQ02539 AC009102.2-201ENST00000606772 1639 ntBASIC16.52■□□□□ 0.23
HIST1H1AQ02539 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HIST1H1AQ02539 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H1AQ02539 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H1AQ02539 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HIST1H1AQ02539 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HIST1H1AQ02539 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H1AQ02539 C11orf96-202ENST00000528572 1834 ntBASIC16.5■□□□□ 0.23
HIST1H1AQ02539 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.5■□□□□ 0.23
HIST1H1AQ02539 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.5■□□□□ 0.23
HIST1H1AQ02539 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HIST1H1AQ02539 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.5■□□□□ 0.23
HIST1H1AQ02539 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.49■□□□□ 0.23
HIST1H1AQ02539 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.49■□□□□ 0.23
HIST1H1AQ02539 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H1AQ02539 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H1AQ02539 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.49■□□□□ 0.23
HIST1H1AQ02539 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H1AQ02539 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST1H1AQ02539 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H1AQ02539 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.49■□□□□ 0.23
HIST1H1AQ02539 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HIST1H1AQ02539 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.49■□□□□ 0.23
HIST1H1AQ02539 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms