Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
TUBA4AP68366 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TUBA4AP68366 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA4AP68366 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA4AP68366 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA4AP68366 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TUBA4AP68366 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA4AP68366 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA4AP68366 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA4AP68366 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA4AP68366 AC137630.3-201ENST00000607245 391 ntBASIC20.31■□□□□ 0.84
TUBA4AP68366 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA4AP68366 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.31■□□□□ 0.84
TUBA4AP68366 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TUBA4AP68366 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBA4AP68366 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TUBA4AP68366 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBA4AP68366 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TUBA4AP68366 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TUBA4AP68366 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.3■□□□□ 0.84
TUBA4AP68366 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.3■□□□□ 0.84
TUBA4AP68366 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TUBA4AP68366 KRT125P-201ENST00000546827 989 ntBASIC20.3■□□□□ 0.84
TUBA4AP68366 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TUBA4AP68366 AC007952.6-201ENST00000573168 2673 ntBASIC20.3■□□□□ 0.84
TUBA4AP68366 AC003957.1-201ENST00000625108 2673 ntBASIC20.3■□□□□ 0.84
TUBA4AP68366 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.3■□□□□ 0.84
TUBA4AP68366 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TUBA4AP68366 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TUBA4AP68366 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA4AP68366 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA4AP68366 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA4AP68366 AL157384.1-201ENST00000445995 2473 ntBASIC20.29■□□□□ 0.84
TUBA4AP68366 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA4AP68366 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA4AP68366 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.29■□□□□ 0.84
TUBA4AP68366 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.29■□□□□ 0.84
TUBA4AP68366 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.29■□□□□ 0.84
TUBA4AP68366 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA4AP68366 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.29■□□□□ 0.84
TUBA4AP68366 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA4AP68366 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TUBA4AP68366 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA4AP68366 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
TUBA4AP68366 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBA4AP68366 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA4AP68366 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TUBA4AP68366 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA4AP68366 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.28■□□□□ 0.84
TUBA4AP68366 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.28■□□□□ 0.84
TUBA4AP68366 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA4AP68366 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.28■□□□□ 0.84
TUBA4AP68366 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.28■□□□□ 0.84
TUBA4AP68366 MIR4787-201ENST00000607364 84 ntBASIC20.28■□□□□ 0.84
TUBA4AP68366 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA4AP68366 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TUBA4AP68366 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA4AP68366 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.28■□□□□ 0.84
TUBA4AP68366 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TUBA4AP68366 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA4AP68366 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA4AP68366 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBA4AP68366 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA4AP68366 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA4AP68366 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.27■□□□□ 0.84
TUBA4AP68366 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
TUBA4AP68366 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA4AP68366 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA4AP68366 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA4AP68366 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA4AP68366 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TUBA4AP68366 Z92544.1-202ENST00000571933 1220 ntBASIC20.27■□□□□ 0.84
TUBA4AP68366 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA4AP68366 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBA4AP68366 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TUBA4AP68366 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TUBA4AP68366 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TUBA4AP68366 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.26■□□□□ 0.83
TUBA4AP68366 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.26■□□□□ 0.83
TUBA4AP68366 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA4AP68366 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA4AP68366 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA4AP68366 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TUBA4AP68366 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.26■□□□□ 0.83
TUBA4AP68366 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TUBA4AP68366 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA4AP68366 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.26■□□□□ 0.83
TUBA4AP68366 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBA4AP68366 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
TUBA4AP68366 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA4AP68366 AC021242.3-201ENST00000607598 1377 ntBASIC20.25■□□□□ 0.83
TUBA4AP68366 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TUBA4AP68366 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TUBA4AP68366 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA4AP68366 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TUBA4AP68366 AC244015.2-201ENST00000616358 1861 ntBASIC20.25■□□□□ 0.83
TUBA4AP68366 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA4AP68366 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBA4AP68366 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.25■□□□□ 0.83
TUBA4AP68366 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms