Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS4XP62701 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RPS4XP62701 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RPS4XP62701 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.68■□□□□ 0.74
RPS4XP62701 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS4XP62701 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4XP62701 AC006455.2-201ENST00000429931 906 ntBASIC19.67■□□□□ 0.74
RPS4XP62701 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4XP62701 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.67■□□□□ 0.74
RPS4XP62701 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4XP62701 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RPS4XP62701 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4XP62701 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RPS4XP62701 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4XP62701 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RPS4XP62701 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RPS4XP62701 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS4XP62701 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS4XP62701 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS4XP62701 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS4XP62701 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.66■□□□□ 0.74
RPS4XP62701 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS4XP62701 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS4XP62701 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS4XP62701 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RPS4XP62701 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RPS4XP62701 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.66■□□□□ 0.74
RPS4XP62701 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.66■□□□□ 0.74
RPS4XP62701 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RPS4XP62701 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RPS4XP62701 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RPS4XP62701 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.65■□□□□ 0.74
RPS4XP62701 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.65■□□□□ 0.74
RPS4XP62701 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.65■□□□□ 0.74
RPS4XP62701 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.65■□□□□ 0.74
RPS4XP62701 DUX4L19-201ENST00000557448 1267 ntBASIC19.65■□□□□ 0.74
RPS4XP62701 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RPS4XP62701 AL031602.1-201ENST00000633169 911 ntBASIC19.65■□□□□ 0.74
RPS4XP62701 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.65■□□□□ 0.74
RPS4XP62701 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 AC133637.1-201ENST00000624115 1537 ntBASIC19.65■□□□□ 0.74
RPS4XP62701 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4XP62701 EDA-201ENST00000338901 1233 ntBASIC19.64■□□□□ 0.73
RPS4XP62701 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
RPS4XP62701 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.64■□□□□ 0.73
RPS4XP62701 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RPS4XP62701 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4XP62701 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.64■□□□□ 0.73
RPS4XP62701 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.64■□□□□ 0.73
RPS4XP62701 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4XP62701 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4XP62701 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RPS4XP62701 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4XP62701 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4XP62701 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4XP62701 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4XP62701 AC024257.2-201ENST00000549699 147 ntBASIC19.63■□□□□ 0.73
RPS4XP62701 AC099791.2-201ENST00000605725 427 ntBASIC19.63■□□□□ 0.73
RPS4XP62701 AC092171.4-201ENST00000609130 632 ntBASIC19.63■□□□□ 0.73
RPS4XP62701 AL355001.2-201ENST00000620617 1191 ntBASIC19.63■□□□□ 0.73
RPS4XP62701 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4XP62701 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RPS4XP62701 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RPS4XP62701 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 ZNRF2P3-201ENST00000424200 374 ntBASIC19.62■□□□□ 0.73
RPS4XP62701 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RPS4XP62701 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RPS4XP62701 pRNA.6-201ENST00000610482 90 ntBASIC19.62■□□□□ 0.73
RPS4XP62701 pRNA.5-201ENST00000612139 90 ntBASIC19.62■□□□□ 0.73
RPS4XP62701 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RPS4XP62701 pRNA.11-201ENST00000618423 90 ntBASIC19.62■□□□□ 0.73
RPS4XP62701 pRNA.13-201ENST00000619112 90 ntBASIC19.62■□□□□ 0.73
RPS4XP62701 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.62■□□□□ 0.73
RPS4XP62701 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.62■□□□□ 0.73
RPS4XP62701 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.62■□□□□ 0.73
RPS4XP62701 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4XP62701 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
RPS4XP62701 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms