Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FAM3BP58499 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.85■□□□□ 0.29
FAM3BP58499 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
FAM3BP58499 AC010542.4-201ENST00000563151 1910 ntBASIC16.84■□□□□ 0.29
FAM3BP58499 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM3BP58499 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM3BP58499 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.84■□□□□ 0.29
FAM3BP58499 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM3BP58499 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM3BP58499 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM3BP58499 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM3BP58499 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM3BP58499 MIR6765-201ENST00000614092 87 ntBASIC16.84■□□□□ 0.29
FAM3BP58499 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM3BP58499 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FAM3BP58499 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
FAM3BP58499 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FAM3BP58499 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
FAM3BP58499 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM3BP58499 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM3BP58499 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM3BP58499 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.83■□□□□ 0.28
FAM3BP58499 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FAM3BP58499 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM3BP58499 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
FAM3BP58499 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM3BP58499 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FAM3BP58499 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
FAM3BP58499 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.83■□□□□ 0.28
FAM3BP58499 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FAM3BP58499 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.83■□□□□ 0.28
FAM3BP58499 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.83■□□□□ 0.28
FAM3BP58499 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
FAM3BP58499 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM3BP58499 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.82■□□□□ 0.28
FAM3BP58499 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM3BP58499 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM3BP58499 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM3BP58499 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM3BP58499 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
FAM3BP58499 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM3BP58499 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.82■□□□□ 0.28
FAM3BP58499 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FAM3BP58499 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
FAM3BP58499 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM3BP58499 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM3BP58499 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FAM3BP58499 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM3BP58499 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
FAM3BP58499 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.82■□□□□ 0.28
FAM3BP58499 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FAM3BP58499 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM3BP58499 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM3BP58499 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM3BP58499 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM3BP58499 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM3BP58499 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM3BP58499 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM3BP58499 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
FAM3BP58499 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM3BP58499 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM3BP58499 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM3BP58499 DUX4L9-201ENST00000449051 1259 ntBASIC16.81■□□□□ 0.28
FAM3BP58499 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM3BP58499 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM3BP58499 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM3BP58499 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM3BP58499 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM3BP58499 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM3BP58499 KRT18P10-201ENST00000388836 1287 ntBASIC16.8■□□□□ 0.28
FAM3BP58499 AC139795.1-202ENST00000500444 432 ntBASIC16.8■□□□□ 0.28
FAM3BP58499 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FAM3BP58499 DUX4L18-201ENST00000553347 1267 ntBASIC16.8■□□□□ 0.28
FAM3BP58499 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.8■□□□□ 0.28
FAM3BP58499 BHLHE23-202ENST00000612929 1109 ntBASIC16.8■□□□□ 0.28
FAM3BP58499 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM3BP58499 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FAM3BP58499 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM3BP58499 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM3BP58499 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FAM3BP58499 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
FAM3BP58499 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM3BP58499 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM3BP58499 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.79■□□□□ 0.28
FAM3BP58499 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM3BP58499 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FAM3BP58499 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM3BP58499 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM3BP58499 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FAM3BP58499 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM3BP58499 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FAM3BP58499 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM3BP58499 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM3BP58499 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM3BP58499 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM3BP58499 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
FAM3BP58499 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM3BP58499 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM3BP58499 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM3BP58499 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms