Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.9■□□□□ 0.78
CLDN20P56880 AC027682.1-201ENST00000562846 899 ntBASIC19.9■□□□□ 0.78
CLDN20P56880 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN20P56880 AC010525.1-201ENST00000585559 441 ntBASIC19.9■□□□□ 0.78
CLDN20P56880 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CLDN20P56880 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN20P56880 AC233992.3-201ENST00000607491 485 ntBASIC19.9■□□□□ 0.78
CLDN20P56880 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN20P56880 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN20P56880 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN20P56880 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN20P56880 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN20P56880 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN20P56880 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN20P56880 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLDN20P56880 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN20P56880 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
CLDN20P56880 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CLDN20P56880 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN20P56880 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.89■□□□□ 0.77
CLDN20P56880 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.89■□□□□ 0.77
CLDN20P56880 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN20P56880 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLDN20P56880 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CLDN20P56880 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN20P56880 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN20P56880 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN20P56880 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN20P56880 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN20P56880 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLDN20P56880 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLDN20P56880 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN20P56880 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN20P56880 RASA4CP-201ENST00000424092 1398 ntBASIC19.88■□□□□ 0.77
CLDN20P56880 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN20P56880 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN20P56880 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLDN20P56880 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN20P56880 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLDN20P56880 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN20P56880 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN20P56880 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN20P56880 DUSP8P3-201ENST00000399571 1760 ntBASIC19.88■□□□□ 0.77
CLDN20P56880 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN20P56880 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN20P56880 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN20P56880 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN20P56880 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLDN20P56880 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN20P56880 OR2I1P-207ENST00000453522 948 ntBASIC19.87■□□□□ 0.77
CLDN20P56880 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN20P56880 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN20P56880 CA15P2-201ENST00000611168 834 ntBASIC19.87■□□□□ 0.77
CLDN20P56880 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN20P56880 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDN20P56880 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN20P56880 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CLDN20P56880 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CLDN20P56880 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLDN20P56880 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN20P56880 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLDN20P56880 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN20P56880 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN20P56880 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CLDN20P56880 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLDN20P56880 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLDN20P56880 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN20P56880 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN20P56880 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CLDN20P56880 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN20P56880 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN20P56880 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLDN20P56880 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN20P56880 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN20P56880 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN20P56880 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN20P56880 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN20P56880 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLDN20P56880 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN20P56880 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN20P56880 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN20P56880 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.85■□□□□ 0.77
CLDN20P56880 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLDN20P56880 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN20P56880 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN20P56880 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN20P56880 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN20P56880 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN20P56880 ZNRF2P3-201ENST00000424200 374 ntBASIC19.84■□□□□ 0.77
CLDN20P56880 AC105265.2-201ENST00000467189 838 ntBASIC19.84■□□□□ 0.77
CLDN20P56880 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN20P56880 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN20P56880 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.84■□□□□ 0.77
CLDN20P56880 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN20P56880 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN20P56880 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN20P56880 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN20P56880 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN20P56880 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CLDN20P56880 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms