Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH3BGRP55822 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH3BGRP55822 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH3BGRP55822 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3BGRP55822 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.6■□□□□ 0.89
SH3BGRP55822 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3BGRP55822 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3BGRP55822 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SH3BGRP55822 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3BGRP55822 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3BGRP55822 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3BGRP55822 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
SH3BGRP55822 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.6■□□□□ 0.89
SH3BGRP55822 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3BGRP55822 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH3BGRP55822 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3BGRP55822 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.59■□□□□ 0.89
SH3BGRP55822 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3BGRP55822 AC090877.2-201ENST00000558441 1738 ntBASIC20.59■□□□□ 0.89
SH3BGRP55822 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3BGRP55822 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3BGRP55822 AC120024.1-201ENST00000562672 995 ntBASIC20.59■□□□□ 0.89
SH3BGRP55822 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SH3BGRP55822 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
SH3BGRP55822 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH3BGRP55822 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
SH3BGRP55822 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
SH3BGRP55822 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SH3BGRP55822 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SH3BGRP55822 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SH3BGRP55822 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
SH3BGRP55822 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3BGRP55822 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.57■□□□□ 0.88
SH3BGRP55822 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3BGRP55822 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SH3BGRP55822 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.57■□□□□ 0.88
SH3BGRP55822 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3BGRP55822 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.57■□□□□ 0.88
SH3BGRP55822 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3BGRP55822 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3BGRP55822 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SH3BGRP55822 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SH3BGRP55822 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SH3BGRP55822 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH3BGRP55822 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3BGRP55822 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.56■□□□□ 0.88
SH3BGRP55822 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.56■□□□□ 0.88
SH3BGRP55822 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SH3BGRP55822 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SH3BGRP55822 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3BGRP55822 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3BGRP55822 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.55■□□□□ 0.88
SH3BGRP55822 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SH3BGRP55822 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.55■□□□□ 0.88
SH3BGRP55822 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SH3BGRP55822 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3BGRP55822 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH3BGRP55822 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.55■□□□□ 0.88
SH3BGRP55822 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.55■□□□□ 0.88
SH3BGRP55822 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH3BGRP55822 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3BGRP55822 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3BGRP55822 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH3BGRP55822 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.55■□□□□ 0.88
SH3BGRP55822 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH3BGRP55822 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SH3BGRP55822 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3BGRP55822 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3BGRP55822 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3BGRP55822 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3BGRP55822 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3BGRP55822 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3BGRP55822 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.54■□□□□ 0.88
SH3BGRP55822 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.54■□□□□ 0.88
SH3BGRP55822 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3BGRP55822 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3BGRP55822 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SH3BGRP55822 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH3BGRP55822 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH3BGRP55822 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SH3BGRP55822 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.54■□□□□ 0.88
SH3BGRP55822 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SH3BGRP55822 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH3BGRP55822 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3BGRP55822 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3BGRP55822 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH3BGRP55822 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3BGRP55822 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3BGRP55822 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SH3BGRP55822 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH3BGRP55822 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH3BGRP55822 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH3BGRP55822 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH3BGRP55822 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3BGRP55822 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3BGRP55822 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3BGRP55822 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH3BGRP55822 MIR4281-201ENST00000580852 62 ntBASIC20.52■□□□□ 0.88
SH3BGRP55822 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SH3BGRP55822 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms