Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
TTC3P53804 DUX4L16-201ENST00000555130 1264 ntBASIC23.59■■□□□ 1.37
TTC3P53804 AC011767.1-201ENST00000617410 1153 ntBASIC23.59■■□□□ 1.37
TTC3P53804 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TTC3P53804 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC3P53804 OXCT2P1-201ENST00000447263 1535 ntBASIC23.59■■□□□ 1.37
TTC3P53804 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
TTC3P53804 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC3P53804 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC3P53804 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC3P53804 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC3P53804 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC3P53804 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TTC3P53804 DUSP8P3-201ENST00000399571 1760 ntBASIC23.58■■□□□ 1.37
TTC3P53804 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.58■■□□□ 1.37
TTC3P53804 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TTC3P53804 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.58■■□□□ 1.37
TTC3P53804 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.58■■□□□ 1.37
TTC3P53804 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TTC3P53804 AL050303.2-201ENST00000619798 666 ntBASIC23.58■■□□□ 1.37
TTC3P53804 AC009237.3-201ENST00000393279 1427 ntBASIC23.58■■□□□ 1.36
TTC3P53804 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.58■■□□□ 1.36
TTC3P53804 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC3P53804 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC3P53804 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TTC3P53804 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC3P53804 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.57■■□□□ 1.36
TTC3P53804 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC3P53804 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.57■■□□□ 1.36
TTC3P53804 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.57■■□□□ 1.36
TTC3P53804 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
TTC3P53804 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC3P53804 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC3P53804 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TTC3P53804 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
TTC3P53804 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TTC3P53804 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.57■■□□□ 1.36
TTC3P53804 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
TTC3P53804 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC3P53804 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC3P53804 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC3P53804 AC142086.2-201ENST00000569753 217 ntBASIC23.56■■□□□ 1.36
TTC3P53804 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.56■■□□□ 1.36
TTC3P53804 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.56■■□□□ 1.36
TTC3P53804 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.56■■□□□ 1.36
TTC3P53804 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC3P53804 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TTC3P53804 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC3P53804 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TTC3P53804 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC3P53804 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC3P53804 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC3P53804 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC3P53804 GPX1P1-201ENST00000388829 606 ntBASIC23.55■■□□□ 1.36
TTC3P53804 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.55■■□□□ 1.36
TTC3P53804 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.55■■□□□ 1.36
TTC3P53804 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC3P53804 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TTC3P53804 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TTC3P53804 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TTC3P53804 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TTC3P53804 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.55■■□□□ 1.36
TTC3P53804 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC3P53804 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC3P53804 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
TTC3P53804 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.54■■□□□ 1.36
TTC3P53804 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
TTC3P53804 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TTC3P53804 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
TTC3P53804 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.54■■□□□ 1.36
TTC3P53804 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TTC3P53804 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TTC3P53804 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.53■■□□□ 1.36
TTC3P53804 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.53■■□□□ 1.36
TTC3P53804 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.53■■□□□ 1.36
TTC3P53804 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TTC3P53804 UBE2DNL-204ENST00000602536 740 ntBASIC23.53■■□□□ 1.36
TTC3P53804 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.52■■□□□ 1.36
TTC3P53804 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
TTC3P53804 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.52■■□□□ 1.36
TTC3P53804 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TTC3P53804 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TTC3P53804 SLC7A5P2-201ENST00000553010 536 ntBASIC23.52■■□□□ 1.36
TTC3P53804 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.35
TTC3P53804 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
TTC3P53804 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TTC3P53804 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC3P53804 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TTC3P53804 CNN2P6-201ENST00000439038 900 ntBASIC23.51■■□□□ 1.35
TTC3P53804 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.51■■□□□ 1.35
TTC3P53804 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.51■■□□□ 1.35
TTC3P53804 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC3P53804 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.51■■□□□ 1.35
TTC3P53804 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TTC3P53804 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TTC3P53804 GUSBP6-202ENST00000438529 1198 ntBASIC23.5■■□□□ 1.35
TTC3P53804 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.5■■□□□ 1.35
TTC3P53804 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TTC3P53804 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TTC3P53804 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms