Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
THBS3P49746 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
THBS3P49746 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
THBS3P49746 AC092053.2-201ENST00000640557 1818 ntBASIC17.91■□□□□ 0.46
THBS3P49746 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
THBS3P49746 LINC00565-201ENST00000562710 2331 ntBASIC17.9■□□□□ 0.46
THBS3P49746 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
THBS3P49746 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
THBS3P49746 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.9■□□□□ 0.46
THBS3P49746 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
THBS3P49746 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
THBS3P49746 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
THBS3P49746 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.9■□□□□ 0.46
THBS3P49746 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.9■□□□□ 0.46
THBS3P49746 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.9■□□□□ 0.46
THBS3P49746 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.9■□□□□ 0.46
THBS3P49746 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
THBS3P49746 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.9■□□□□ 0.46
THBS3P49746 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.9■□□□□ 0.46
THBS3P49746 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
THBS3P49746 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
THBS3P49746 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
THBS3P49746 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
THBS3P49746 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.9■□□□□ 0.46
THBS3P49746 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
THBS3P49746 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
THBS3P49746 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
THBS3P49746 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS3P49746 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.89■□□□□ 0.45
THBS3P49746 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
THBS3P49746 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
THBS3P49746 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS3P49746 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS3P49746 LINC01960-201ENST00000563759 1884 ntBASIC17.89■□□□□ 0.45
THBS3P49746 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS3P49746 AL136116.3-201ENST00000402907 1138 ntBASIC17.89■□□□□ 0.45
THBS3P49746 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.89■□□□□ 0.45
THBS3P49746 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS3P49746 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS3P49746 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS3P49746 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THBS3P49746 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
THBS3P49746 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
THBS3P49746 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
THBS3P49746 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
THBS3P49746 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
THBS3P49746 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
THBS3P49746 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.88■□□□□ 0.45
THBS3P49746 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.88■□□□□ 0.45
THBS3P49746 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.88■□□□□ 0.45
THBS3P49746 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
THBS3P49746 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
THBS3P49746 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.88■□□□□ 0.45
THBS3P49746 AC139530.1-201ENST00000575312 1977 ntBASIC17.88■□□□□ 0.45
THBS3P49746 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
THBS3P49746 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
THBS3P49746 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.87■□□□□ 0.45
THBS3P49746 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
THBS3P49746 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
THBS3P49746 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.87■□□□□ 0.45
THBS3P49746 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.87■□□□□ 0.45
THBS3P49746 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
THBS3P49746 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.87■□□□□ 0.45
THBS3P49746 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
THBS3P49746 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
THBS3P49746 AC004687.1-201ENST00000579003 1625 ntBASIC17.87■□□□□ 0.45
THBS3P49746 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.86■□□□□ 0.45
THBS3P49746 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS3P49746 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS3P49746 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS3P49746 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
THBS3P49746 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS3P49746 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS3P49746 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.86■□□□□ 0.45
THBS3P49746 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
THBS3P49746 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms