Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.2■□□□□ 0.66
SRP9P49458 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRP9P49458 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SRP9P49458 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRP9P49458 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SRP9P49458 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SRP9P49458 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.19■□□□□ 0.66
SRP9P49458 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.19■□□□□ 0.66
SRP9P49458 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 AC079630.1-202ENST00000618127 1840 ntBASIC19.19■□□□□ 0.66
SRP9P49458 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.19■□□□□ 0.66
SRP9P49458 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.19■□□□□ 0.66
SRP9P49458 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.19■□□□□ 0.66
SRP9P49458 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.19■□□□□ 0.66
SRP9P49458 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SRP9P49458 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.19■□□□□ 0.66
SRP9P49458 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRP9P49458 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRP9P49458 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRP9P49458 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SRP9P49458 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.18■□□□□ 0.66
SRP9P49458 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.18■□□□□ 0.66
SRP9P49458 AC080038.3-201ENST00000623346 1952 ntBASIC19.18■□□□□ 0.66
SRP9P49458 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SRP9P49458 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.18■□□□□ 0.66
SRP9P49458 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SRP9P49458 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.18■□□□□ 0.66
SRP9P49458 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SRP9P49458 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.18■□□□□ 0.66
SRP9P49458 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SRP9P49458 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRP9P49458 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRP9P49458 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRP9P49458 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRP9P49458 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.17■□□□□ 0.66
SRP9P49458 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.17■□□□□ 0.66
SRP9P49458 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.17■□□□□ 0.66
SRP9P49458 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.17■□□□□ 0.66
SRP9P49458 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRP9P49458 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRP9P49458 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRP9P49458 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRP9P49458 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
SRP9P49458 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SRP9P49458 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRP9P49458 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRP9P49458 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRP9P49458 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.17■□□□□ 0.66
SRP9P49458 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRP9P49458 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.16■□□□□ 0.66
SRP9P49458 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SRP9P49458 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRP9P49458 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRP9P49458 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SRP9P49458 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRP9P49458 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRP9P49458 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.16■□□□□ 0.66
SRP9P49458 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SRP9P49458 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRP9P49458 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SRP9P49458 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRP9P49458 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRP9P49458 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRP9P49458 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRP9P49458 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SRP9P49458 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SRP9P49458 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRP9P49458 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRP9P49458 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.15■□□□□ 0.66
SRP9P49458 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRP9P49458 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.15■□□□□ 0.66
SRP9P49458 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRP9P49458 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRP9P49458 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRP9P49458 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SRP9P49458 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SRP9P49458 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.15■□□□□ 0.66
SRP9P49458 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRP9P49458 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRP9P49458 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRP9P49458 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.15■□□□□ 0.66
SRP9P49458 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SRP9P49458 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SRP9P49458 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SRP9P49458 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SRP9P49458 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRP9P49458 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRP9P49458 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms