Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC34P49427 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.13■□□□□ 0.33
CDC34P49427 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.13■□□□□ 0.33
CDC34P49427 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC34P49427 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDC34P49427 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC34P49427 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDC34P49427 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.13■□□□□ 0.33
CDC34P49427 GPX1-201ENST00000419349 1106 ntBASIC17.13■□□□□ 0.33
CDC34P49427 AL592293.1-201ENST00000502889 1188 ntBASIC17.13■□□□□ 0.33
CDC34P49427 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDC34P49427 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC34P49427 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC34P49427 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.12■□□□□ 0.33
CDC34P49427 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDC34P49427 LINC01960-201ENST00000563759 1884 ntBASIC17.12■□□□□ 0.33
CDC34P49427 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC34P49427 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC34P49427 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.12■□□□□ 0.33
CDC34P49427 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.12■□□□□ 0.33
CDC34P49427 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.12■□□□□ 0.33
CDC34P49427 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDC34P49427 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDC34P49427 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
CDC34P49427 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.12■□□□□ 0.33
CDC34P49427 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC34P49427 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDC34P49427 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC34P49427 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDC34P49427 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC34P49427 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC34P49427 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC34P49427 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC34P49427 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC34P49427 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC34P49427 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.1■□□□□ 0.33
CDC34P49427 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC34P49427 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC34P49427 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC34P49427 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC34P49427 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.09■□□□□ 0.33
CDC34P49427 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC34P49427 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC34P49427 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.09■□□□□ 0.33
CDC34P49427 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC34P49427 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC34P49427 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC34P49427 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC34P49427 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC34P49427 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC34P49427 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDC34P49427 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.09■□□□□ 0.33
CDC34P49427 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC34P49427 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDC34P49427 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC34P49427 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDC34P49427 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC34P49427 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC34P49427 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC34P49427 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC34P49427 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDC34P49427 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.08■□□□□ 0.33
CDC34P49427 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDC34P49427 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDC34P49427 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDC34P49427 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC34P49427 AC004448.1-201ENST00000458332 883 ntBASIC17.08■□□□□ 0.32
CDC34P49427 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CDC34P49427 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.08■□□□□ 0.32
CDC34P49427 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.08■□□□□ 0.32
CDC34P49427 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC34P49427 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDC34P49427 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC34P49427 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.07■□□□□ 0.32
CDC34P49427 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC34P49427 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDC34P49427 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC34P49427 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC34P49427 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC34P49427 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC34P49427 DUX4L9-201ENST00000449051 1259 ntBASIC17.07■□□□□ 0.32
CDC34P49427 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC34P49427 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC34P49427 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC34P49427 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDC34P49427 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC34P49427 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC34P49427 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC34P49427 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms