Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC9A3P48764 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC9A3P48764 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC9A3P48764 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC9A3P48764 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC9A3P48764 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SLC9A3P48764 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC9A3P48764 MIR6724-1-201ENST00000616420 92 ntBASIC19.85■□□□□ 0.77
SLC9A3P48764 MIR6724-2-201ENST00000616483 92 ntBASIC19.85■□□□□ 0.77
SLC9A3P48764 MIR6724-4-201ENST00000617390 92 ntBASIC19.85■□□□□ 0.77
SLC9A3P48764 MIR6724-3-201ENST00000622482 92 ntBASIC19.85■□□□□ 0.77
SLC9A3P48764 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC9A3P48764 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SLC9A3P48764 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC9A3P48764 C11orf96-202ENST00000528572 1834 ntBASIC19.85■□□□□ 0.77
SLC9A3P48764 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC9A3P48764 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC9A3P48764 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC9A3P48764 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC9A3P48764 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC9A3P48764 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SLC9A3P48764 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC9A3P48764 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC9A3P48764 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC9A3P48764 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
SLC9A3P48764 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.84■□□□□ 0.77
SLC9A3P48764 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.84■□□□□ 0.77
SLC9A3P48764 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC9A3P48764 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SLC9A3P48764 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC9A3P48764 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC9A3P48764 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC9A3P48764 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC9A3P48764 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC9A3P48764 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC9A3P48764 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC9A3P48764 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC9A3P48764 AC004687.1-201ENST00000579003 1625 ntBASIC19.84■□□□□ 0.77
SLC9A3P48764 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SLC9A3P48764 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.83■□□□□ 0.77
SLC9A3P48764 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC9A3P48764 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC9A3P48764 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC9A3P48764 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SLC9A3P48764 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC9A3P48764 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC9A3P48764 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC9A3P48764 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.83■□□□□ 0.76
SLC9A3P48764 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.83■□□□□ 0.76
SLC9A3P48764 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC9A3P48764 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SLC9A3P48764 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC9A3P48764 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC9A3P48764 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SLC9A3P48764 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC9A3P48764 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
SLC9A3P48764 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC9A3P48764 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC9A3P48764 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC9A3P48764 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SLC9A3P48764 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC9A3P48764 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC9A3P48764 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC9A3P48764 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC9A3P48764 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC9A3P48764 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SLC9A3P48764 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC9A3P48764 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC9A3P48764 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC9A3P48764 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC9A3P48764 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC9A3P48764 AL499627.2-201ENST00000606283 725 ntBASIC19.81■□□□□ 0.76
SLC9A3P48764 AL117332.1-201ENST00000622628 974 ntBASIC19.81■□□□□ 0.76
SLC9A3P48764 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC9A3P48764 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SLC9A3P48764 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC9A3P48764 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
SLC9A3P48764 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC9A3P48764 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC9A3P48764 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SLC9A3P48764 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC9A3P48764 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC9A3P48764 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC9A3P48764 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC9A3P48764 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC9A3P48764 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC9A3P48764 UNC93B8-201ENST00000511903 705 ntBASIC19.8■□□□□ 0.76
SLC9A3P48764 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC9A3P48764 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC9A3P48764 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC9A3P48764 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
SLC9A3P48764 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC9A3P48764 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC9A3P48764 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC9A3P48764 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC9A3P48764 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC9A3P48764 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SLC9A3P48764 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC9A3P48764 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC9A3P48764 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms