Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA4P48169 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.71■□□□□ 0.91
GABRA4P48169 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA4P48169 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA4P48169 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA4P48169 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA4P48169 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA4P48169 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA4P48169 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.71■□□□□ 0.91
GABRA4P48169 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA4P48169 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA4P48169 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GABRA4P48169 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.71■□□□□ 0.91
GABRA4P48169 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
GABRA4P48169 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
GABRA4P48169 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA4P48169 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
GABRA4P48169 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
GABRA4P48169 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA4P48169 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.7■□□□□ 0.9
GABRA4P48169 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.7■□□□□ 0.9
GABRA4P48169 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA4P48169 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GABRA4P48169 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.7■□□□□ 0.9
GABRA4P48169 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA4P48169 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
GABRA4P48169 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA4P48169 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA4P48169 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
GABRA4P48169 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA4P48169 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.69■□□□□ 0.9
GABRA4P48169 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.69■□□□□ 0.9
GABRA4P48169 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GABRA4P48169 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA4P48169 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA4P48169 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
GABRA4P48169 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GABRA4P48169 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.69■□□□□ 0.9
GABRA4P48169 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA4P48169 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GABRA4P48169 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA4P48169 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA4P48169 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA4P48169 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA4P48169 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA4P48169 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA4P48169 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA4P48169 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA4P48169 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA4P48169 AC092666.2-201ENST00000613287 246 ntBASIC20.68■□□□□ 0.9
GABRA4P48169 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.68■□□□□ 0.9
GABRA4P48169 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA4P48169 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABRA4P48169 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
GABRA4P48169 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.67■□□□□ 0.9
GABRA4P48169 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
GABRA4P48169 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABRA4P48169 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.67■□□□□ 0.9
GABRA4P48169 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.67■□□□□ 0.9
GABRA4P48169 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GABRA4P48169 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.67■□□□□ 0.9
GABRA4P48169 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.67■□□□□ 0.9
GABRA4P48169 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GABRA4P48169 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.67■□□□□ 0.9
GABRA4P48169 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABRA4P48169 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.67■□□□□ 0.9
GABRA4P48169 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
GABRA4P48169 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA4P48169 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA4P48169 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA4P48169 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.66■□□□□ 0.9
GABRA4P48169 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA4P48169 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.66■□□□□ 0.9
GABRA4P48169 KRT18P61-201ENST00000585825 1298 ntBASIC20.66■□□□□ 0.9
GABRA4P48169 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.66■□□□□ 0.9
GABRA4P48169 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA4P48169 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA4P48169 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABRA4P48169 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.66■□□□□ 0.9
GABRA4P48169 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.66■□□□□ 0.9
GABRA4P48169 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GABRA4P48169 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABRA4P48169 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABRA4P48169 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABRA4P48169 LINC00526-201ENST00000581067 1875 ntBASIC20.65■□□□□ 0.9
GABRA4P48169 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.65■□□□□ 0.9
GABRA4P48169 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.65■□□□□ 0.9
GABRA4P48169 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.65■□□□□ 0.9
GABRA4P48169 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GABRA4P48169 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GABRA4P48169 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GABRA4P48169 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.65■□□□□ 0.9
GABRA4P48169 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GABRA4P48169 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.65■□□□□ 0.9
GABRA4P48169 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
GABRA4P48169 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.64■□□□□ 0.89
GABRA4P48169 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GABRA4P48169 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GABRA4P48169 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.64■□□□□ 0.89
GABRA4P48169 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms