Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SFTPDP35247 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SFTPDP35247 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.67■□□□□ 0.74
SFTPDP35247 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.67■□□□□ 0.74
SFTPDP35247 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.67■□□□□ 0.74
SFTPDP35247 IGHV3-19-201ENST00000521488 291 ntBASIC19.67■□□□□ 0.74
SFTPDP35247 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.67■□□□□ 0.74
SFTPDP35247 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SFTPDP35247 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SFTPDP35247 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SFTPDP35247 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.67■□□□□ 0.74
SFTPDP35247 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SFTPDP35247 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SFTPDP35247 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SFTPDP35247 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SFTPDP35247 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.66■□□□□ 0.74
SFTPDP35247 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SFTPDP35247 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.66■□□□□ 0.74
SFTPDP35247 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SFTPDP35247 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.66■□□□□ 0.74
SFTPDP35247 AC010141.3-201ENST00000456659 717 ntBASIC19.66■□□□□ 0.74
SFTPDP35247 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SFTPDP35247 AC019069.1-201ENST00000610008 1333 ntBASIC19.66■□□□□ 0.74
SFTPDP35247 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SFTPDP35247 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SFTPDP35247 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.66■□□□□ 0.74
SFTPDP35247 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SFTPDP35247 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SFTPDP35247 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SFTPDP35247 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SFTPDP35247 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SFTPDP35247 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SFTPDP35247 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SFTPDP35247 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.65■□□□□ 0.74
SFTPDP35247 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.65■□□□□ 0.74
SFTPDP35247 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.65■□□□□ 0.74
SFTPDP35247 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SFTPDP35247 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
SFTPDP35247 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SFTPDP35247 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SFTPDP35247 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.65■□□□□ 0.74
SFTPDP35247 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SFTPDP35247 AC012676.1-201ENST00000574705 1949 ntBASIC19.64■□□□□ 0.74
SFTPDP35247 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SFTPDP35247 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SFTPDP35247 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SFTPDP35247 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.64■□□□□ 0.73
SFTPDP35247 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
SFTPDP35247 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.64■□□□□ 0.73
SFTPDP35247 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SFTPDP35247 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.64■□□□□ 0.73
SFTPDP35247 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.64■□□□□ 0.73
SFTPDP35247 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SFTPDP35247 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SFTPDP35247 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 AC233723.2-201ENST00000623798 2106 ntBASIC19.63■□□□□ 0.73
SFTPDP35247 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SFTPDP35247 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.63■□□□□ 0.73
SFTPDP35247 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.63■□□□□ 0.73
SFTPDP35247 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.63■□□□□ 0.73
SFTPDP35247 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SFTPDP35247 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SFTPDP35247 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SFTPDP35247 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
SFTPDP35247 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SFTPDP35247 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.62■□□□□ 0.73
SFTPDP35247 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.62■□□□□ 0.73
SFTPDP35247 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.62■□□□□ 0.73
SFTPDP35247 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SFTPDP35247 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SFTPDP35247 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SFTPDP35247 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SFTPDP35247 ESRRAP2-201ENST00000418437 1549 ntBASIC19.61■□□□□ 0.73
SFTPDP35247 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPDP35247 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.61■□□□□ 0.73
SFTPDP35247 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPDP35247 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.61■□□□□ 0.73
SFTPDP35247 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPDP35247 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPDP35247 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.61■□□□□ 0.73
SFTPDP35247 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPDP35247 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPDP35247 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SFTPDP35247 ZNRF2P3-201ENST00000424200 374 ntBASIC19.61■□□□□ 0.73
SFTPDP35247 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.61■□□□□ 0.73
SFTPDP35247 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms