Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GDF1P27539 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GDF1P27539 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
GDF1P27539 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
GDF1P27539 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GDF1P27539 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
GDF1P27539 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GDF1P27539 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
GDF1P27539 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.73■□□□□ 0.75
GDF1P27539 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.73■□□□□ 0.75
GDF1P27539 AC104564.3-201ENST00000582367 638 ntBASIC19.73■□□□□ 0.75
GDF1P27539 SMUG1P1-201ENST00000590640 811 ntBASIC19.73■□□□□ 0.75
GDF1P27539 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.73■□□□□ 0.75
GDF1P27539 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GDF1P27539 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GDF1P27539 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GDF1P27539 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
GDF1P27539 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
GDF1P27539 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.72■□□□□ 0.75
GDF1P27539 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDF1P27539 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.72■□□□□ 0.75
GDF1P27539 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDF1P27539 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDF1P27539 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.72■□□□□ 0.75
GDF1P27539 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.72■□□□□ 0.75
GDF1P27539 CCDC92B-201ENST00000575506 885 ntBASIC19.72■□□□□ 0.75
GDF1P27539 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDF1P27539 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GDF1P27539 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDF1P27539 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GDF1P27539 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.71■□□□□ 0.75
GDF1P27539 BX005040.4-201ENST00000637145 1518 ntBASIC19.71■□□□□ 0.75
GDF1P27539 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
GDF1P27539 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDF1P27539 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDF1P27539 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
GDF1P27539 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GDF1P27539 KRT18P14-201ENST00000534205 1250 ntBASIC19.71■□□□□ 0.75
GDF1P27539 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.71■□□□□ 0.75
GDF1P27539 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.71■□□□□ 0.75
GDF1P27539 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
GDF1P27539 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDF1P27539 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
GDF1P27539 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.71■□□□□ 0.75
GDF1P27539 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDF1P27539 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDF1P27539 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GDF1P27539 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDF1P27539 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GDF1P27539 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.71■□□□□ 0.74
GDF1P27539 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.7■□□□□ 0.74
GDF1P27539 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GDF1P27539 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GDF1P27539 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
GDF1P27539 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDF1P27539 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
GDF1P27539 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GDF1P27539 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDF1P27539 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.7■□□□□ 0.74
GDF1P27539 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.7■□□□□ 0.74
GDF1P27539 DUX4L2-201ENST00000561772 1275 ntBASIC19.7■□□□□ 0.74
GDF1P27539 AC092666.2-201ENST00000613287 246 ntBASIC19.7■□□□□ 0.74
GDF1P27539 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
GDF1P27539 DUX4L6-201ENST00000626483 1275 ntBASIC19.7■□□□□ 0.74
GDF1P27539 DUX4L1-201ENST00000627662 1275 ntBASIC19.7■□□□□ 0.74
GDF1P27539 DUX4L8-201ENST00000629013 1275 ntBASIC19.7■□□□□ 0.74
GDF1P27539 DUX4L3-201ENST00000630187 1275 ntBASIC19.7■□□□□ 0.74
GDF1P27539 DUX4L7-201ENST00000630678 1275 ntBASIC19.7■□□□□ 0.74
GDF1P27539 DUX4L5-201ENST00000630834 1275 ntBASIC19.7■□□□□ 0.74
GDF1P27539 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
GDF1P27539 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GDF1P27539 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GDF1P27539 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.7■□□□□ 0.74
GDF1P27539 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GDF1P27539 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GDF1P27539 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDF1P27539 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GDF1P27539 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDF1P27539 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
GDF1P27539 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
GDF1P27539 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDF1P27539 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.69■□□□□ 0.74
GDF1P27539 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
GDF1P27539 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDF1P27539 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GDF1P27539 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.69■□□□□ 0.74
GDF1P27539 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDF1P27539 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GDF1P27539 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
GDF1P27539 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDF1P27539 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDF1P27539 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.68■□□□□ 0.74
GDF1P27539 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
GDF1P27539 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GDF1P27539 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GDF1P27539 TERF1P2-201ENST00000583350 1212 ntBASIC19.68■□□□□ 0.74
GDF1P27539 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.68■□□□□ 0.74
GDF1P27539 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.68■□□□□ 0.74
GDF1P27539 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDF1P27539 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms