Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACKR3P25106 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACKR3P25106 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.86■□□□□ 0.61
ACKR3P25106 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACKR3P25106 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACKR3P25106 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.86■□□□□ 0.61
ACKR3P25106 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.86■□□□□ 0.61
ACKR3P25106 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.86■□□□□ 0.61
ACKR3P25106 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.86■□□□□ 0.61
ACKR3P25106 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.86■□□□□ 0.61
ACKR3P25106 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.86■□□□□ 0.61
ACKR3P25106 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.86■□□□□ 0.61
ACKR3P25106 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACKR3P25106 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ACKR3P25106 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACKR3P25106 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.86■□□□□ 0.61
ACKR3P25106 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ACKR3P25106 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ACKR3P25106 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ACKR3P25106 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.85■□□□□ 0.61
ACKR3P25106 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.85■□□□□ 0.61
ACKR3P25106 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACKR3P25106 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.85■□□□□ 0.61
ACKR3P25106 SRD5A1P1-201ENST00000442297 786 ntBASIC18.85■□□□□ 0.61
ACKR3P25106 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.85■□□□□ 0.61
ACKR3P25106 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.85■□□□□ 0.61
ACKR3P25106 CA15P2-201ENST00000611168 834 ntBASIC18.85■□□□□ 0.61
ACKR3P25106 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACKR3P25106 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACKR3P25106 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.85■□□□□ 0.61
ACKR3P25106 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACKR3P25106 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.85■□□□□ 0.61
ACKR3P25106 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ACKR3P25106 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ACKR3P25106 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.84■□□□□ 0.61
ACKR3P25106 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
ACKR3P25106 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.84■□□□□ 0.61
ACKR3P25106 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.84■□□□□ 0.61
ACKR3P25106 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.84■□□□□ 0.61
ACKR3P25106 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ACKR3P25106 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.84■□□□□ 0.61
ACKR3P25106 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.84■□□□□ 0.61
ACKR3P25106 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ACKR3P25106 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ACKR3P25106 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.84■□□□□ 0.61
ACKR3P25106 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.84■□□□□ 0.61
ACKR3P25106 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.84■□□□□ 0.61
ACKR3P25106 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ACKR3P25106 C11orf96-202ENST00000528572 1834 ntBASIC18.84■□□□□ 0.61
ACKR3P25106 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.83■□□□□ 0.61
ACKR3P25106 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ACKR3P25106 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ACKR3P25106 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ACKR3P25106 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.83■□□□□ 0.61
ACKR3P25106 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ACKR3P25106 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ACKR3P25106 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.83■□□□□ 0.6
ACKR3P25106 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.83■□□□□ 0.6
ACKR3P25106 MIR3181-201ENST00000578512 73 ntBASIC18.83■□□□□ 0.6
ACKR3P25106 MIR4466-201ENST00000606121 54 ntBASIC18.83■□□□□ 0.6
ACKR3P25106 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.83■□□□□ 0.6
ACKR3P25106 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.83■□□□□ 0.6
ACKR3P25106 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ACKR3P25106 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
ACKR3P25106 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ACKR3P25106 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ACKR3P25106 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACKR3P25106 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
ACKR3P25106 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACKR3P25106 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.82■□□□□ 0.6
ACKR3P25106 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.82■□□□□ 0.6
ACKR3P25106 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ACKR3P25106 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.82■□□□□ 0.6
ACKR3P25106 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.82■□□□□ 0.6
ACKR3P25106 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ACKR3P25106 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.82■□□□□ 0.6
ACKR3P25106 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ACKR3P25106 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACKR3P25106 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.81■□□□□ 0.6
ACKR3P25106 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.81■□□□□ 0.6
ACKR3P25106 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.81■□□□□ 0.6
ACKR3P25106 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ACKR3P25106 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACKR3P25106 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACKR3P25106 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ACKR3P25106 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ACKR3P25106 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ACKR3P25106 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.81■□□□□ 0.6
ACKR3P25106 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms