Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
KCNA3P22001 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC27.06■■□□□ 1.92
KCNA3P22001 DUSP5P2-201ENST00000426873 1033 ntBASIC27.06■■□□□ 1.92
KCNA3P22001 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
KCNA3P22001 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
KCNA3P22001 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.06■■□□□ 1.92
KCNA3P22001 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
KCNA3P22001 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
KCNA3P22001 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
KCNA3P22001 PPP1R14BP2-201ENST00000426284 444 ntBASIC27.05■■□□□ 1.92
KCNA3P22001 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.05■■□□□ 1.92
KCNA3P22001 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
KCNA3P22001 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
KCNA3P22001 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.04■■□□□ 1.92
KCNA3P22001 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
KCNA3P22001 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
KCNA3P22001 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC27.04■■□□□ 1.92
KCNA3P22001 MIPEPP3-201ENST00000412105 444 ntBASIC27.04■■□□□ 1.92
KCNA3P22001 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC27.04■■□□□ 1.92
KCNA3P22001 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.04■■□□□ 1.92
KCNA3P22001 AC010536.3-201ENST00000620306 533 ntBASIC27.04■■□□□ 1.92
KCNA3P22001 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.04■■□□□ 1.92
KCNA3P22001 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
KCNA3P22001 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC27.04■■□□□ 1.92
KCNA3P22001 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
KCNA3P22001 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
KCNA3P22001 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
KCNA3P22001 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
KCNA3P22001 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.03■■□□□ 1.92
KCNA3P22001 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
KCNA3P22001 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
KCNA3P22001 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
KCNA3P22001 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC27.03■■□□□ 1.92
KCNA3P22001 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
KCNA3P22001 AL596275.1-201ENST00000423464 877 ntBASIC27.03■■□□□ 1.92
KCNA3P22001 GCSHP5-201ENST00000443090 522 ntBASIC27.03■■□□□ 1.92
KCNA3P22001 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.03■■□□□ 1.92
KCNA3P22001 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.03■■□□□ 1.92
KCNA3P22001 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
KCNA3P22001 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.02■■□□□ 1.92
KCNA3P22001 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
KCNA3P22001 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
KCNA3P22001 AC009237.3-201ENST00000393279 1427 ntBASIC27.02■■□□□ 1.92
KCNA3P22001 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC27.02■■□□□ 1.92
KCNA3P22001 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC27.02■■□□□ 1.92
KCNA3P22001 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.02■■□□□ 1.92
KCNA3P22001 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
KCNA3P22001 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.02■■□□□ 1.92
KCNA3P22001 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
KCNA3P22001 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
KCNA3P22001 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
KCNA3P22001 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC27.01■■□□□ 1.91
KCNA3P22001 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
KCNA3P22001 AP003733.4-201ENST00000623785 1697 ntBASIC27.01■■□□□ 1.91
KCNA3P22001 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
KCNA3P22001 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
KCNA3P22001 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27■■□□□ 1.91
KCNA3P22001 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
KCNA3P22001 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
KCNA3P22001 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
KCNA3P22001 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC27■■□□□ 1.91
KCNA3P22001 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC27■■□□□ 1.91
KCNA3P22001 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27■■□□□ 1.91
KCNA3P22001 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27■■□□□ 1.91
KCNA3P22001 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KCNA3P22001 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
KCNA3P22001 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
KCNA3P22001 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
KCNA3P22001 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.99■■□□□ 1.91
KCNA3P22001 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.99■■□□□ 1.91
KCNA3P22001 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.99■■□□□ 1.91
KCNA3P22001 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.99■■□□□ 1.91
KCNA3P22001 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
KCNA3P22001 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KCNA3P22001 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.98■■□□□ 1.91
KCNA3P22001 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
KCNA3P22001 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.98■■□□□ 1.91
KCNA3P22001 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.98■■□□□ 1.91
KCNA3P22001 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.98■■□□□ 1.91
KCNA3P22001 AC022211.4-201ENST00000625094 2161 ntBASIC26.98■■□□□ 1.91
KCNA3P22001 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
KCNA3P22001 AC079630.1-202ENST00000618127 1840 ntBASIC26.97■■□□□ 1.91
KCNA3P22001 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
KCNA3P22001 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.97■■□□□ 1.91
KCNA3P22001 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.97■■□□□ 1.91
KCNA3P22001 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.97■■□□□ 1.91
KCNA3P22001 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
KCNA3P22001 AP006294.2-201ENST00000641667 209 ntBASIC26.97■■□□□ 1.91
KCNA3P22001 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
KCNA3P22001 AC068338.2-201ENST00000563278 1430 ntBASIC26.97■■□□□ 1.91
KCNA3P22001 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
KCNA3P22001 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
KCNA3P22001 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
KCNA3P22001 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
KCNA3P22001 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
KCNA3P22001 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.96■■□□□ 1.91
KCNA3P22001 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.96■■□□□ 1.91
KCNA3P22001 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
KCNA3P22001 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.96■■□□□ 1.91
KCNA3P22001 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms