Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.9■□□□□ 0.94
CAPN3P20807 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN3P20807 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN3P20807 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.9■□□□□ 0.94
CAPN3P20807 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.9■□□□□ 0.94
CAPN3P20807 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN3P20807 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.9■□□□□ 0.94
CAPN3P20807 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.9■□□□□ 0.94
CAPN3P20807 DUX4L4-201ENST00000566884 1269 ntBASIC20.9■□□□□ 0.94
CAPN3P20807 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CAPN3P20807 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN3P20807 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CAPN3P20807 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.9■□□□□ 0.94
CAPN3P20807 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CAPN3P20807 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.89■□□□□ 0.94
CAPN3P20807 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.89■□□□□ 0.94
CAPN3P20807 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.89■□□□□ 0.94
CAPN3P20807 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN3P20807 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.89■□□□□ 0.93
CAPN3P20807 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.89■□□□□ 0.93
CAPN3P20807 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.89■□□□□ 0.93
CAPN3P20807 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.89■□□□□ 0.93
CAPN3P20807 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.89■□□□□ 0.93
CAPN3P20807 AC005837.3-201ENST00000612163 286 ntBASIC20.89■□□□□ 0.93
CAPN3P20807 MIR6722-201ENST00000617286 78 ntBASIC20.89■□□□□ 0.93
CAPN3P20807 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.89■□□□□ 0.93
CAPN3P20807 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN3P20807 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CAPN3P20807 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.88■□□□□ 0.93
CAPN3P20807 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CAPN3P20807 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN3P20807 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN3P20807 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN3P20807 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN3P20807 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN3P20807 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CAPN3P20807 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN3P20807 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN3P20807 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN3P20807 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CAPN3P20807 AL136116.3-201ENST00000402907 1138 ntBASIC20.87■□□□□ 0.93
CAPN3P20807 AC131281.2-201ENST00000520478 145 ntBASIC20.87■□□□□ 0.93
CAPN3P20807 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.87■□□□□ 0.93
CAPN3P20807 AC133561.4-201ENST00000566112 224 ntBASIC20.87■□□□□ 0.93
CAPN3P20807 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN3P20807 AC005229.4-201ENST00000610085 2198 ntBASIC20.87■□□□□ 0.93
CAPN3P20807 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CAPN3P20807 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.87■□□□□ 0.93
CAPN3P20807 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN3P20807 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN3P20807 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN3P20807 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CAPN3P20807 TSPY9P-201ENST00000440215 945 ntBASIC20.86■□□□□ 0.93
CAPN3P20807 TSPY11P-201ENST00000442607 1045 ntBASIC20.86■□□□□ 0.93
CAPN3P20807 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.86■□□□□ 0.93
CAPN3P20807 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN3P20807 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.86■□□□□ 0.93
CAPN3P20807 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN3P20807 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN3P20807 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CAPN3P20807 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CAPN3P20807 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CAPN3P20807 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CAPN3P20807 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN3P20807 AC004687.1-201ENST00000579003 1625 ntBASIC20.86■□□□□ 0.93
CAPN3P20807 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN3P20807 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN3P20807 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.85■□□□□ 0.93
CAPN3P20807 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN3P20807 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.85■□□□□ 0.93
CAPN3P20807 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CAPN3P20807 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN3P20807 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN3P20807 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN3P20807 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.85■□□□□ 0.93
CAPN3P20807 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CAPN3P20807 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.85■□□□□ 0.93
CAPN3P20807 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.85■□□□□ 0.93
CAPN3P20807 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.85■□□□□ 0.93
CAPN3P20807 AC092666.2-201ENST00000613287 246 ntBASIC20.85■□□□□ 0.93
CAPN3P20807 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN3P20807 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.85■□□□□ 0.93
CAPN3P20807 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN3P20807 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.85■□□□□ 0.93
CAPN3P20807 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN3P20807 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.85■□□□□ 0.93
CAPN3P20807 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN3P20807 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
CAPN3P20807 AC021242.3-201ENST00000607598 1377 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms