Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCK1P16333 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCK1P16333 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
NCK1P16333 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.52■□□□□ 0.87
NCK1P16333 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
NCK1P16333 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCK1P16333 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NCK1P16333 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.51■□□□□ 0.87
NCK1P16333 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCK1P16333 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.51■□□□□ 0.87
NCK1P16333 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.51■□□□□ 0.87
NCK1P16333 AC009086.3-201ENST00000623486 1008 ntBASIC20.51■□□□□ 0.87
NCK1P16333 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.51■□□□□ 0.87
NCK1P16333 AF106564.1-201ENST00000607058 2553 ntBASIC20.51■□□□□ 0.87
NCK1P16333 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.51■□□□□ 0.87
NCK1P16333 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCK1P16333 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCK1P16333 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCK1P16333 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCK1P16333 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCK1P16333 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCK1P16333 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
NCK1P16333 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCK1P16333 AC004687.1-201ENST00000579003 1625 ntBASIC20.5■□□□□ 0.87
NCK1P16333 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.5■□□□□ 0.87
NCK1P16333 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCK1P16333 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.5■□□□□ 0.87
NCK1P16333 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.5■□□□□ 0.87
NCK1P16333 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCK1P16333 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
NCK1P16333 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCK1P16333 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCK1P16333 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCK1P16333 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.49■□□□□ 0.87
NCK1P16333 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCK1P16333 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.49■□□□□ 0.87
NCK1P16333 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.49■□□□□ 0.87
NCK1P16333 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.49■□□□□ 0.87
NCK1P16333 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCK1P16333 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCK1P16333 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCK1P16333 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCK1P16333 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.49■□□□□ 0.87
NCK1P16333 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCK1P16333 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.48■□□□□ 0.87
NCK1P16333 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCK1P16333 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
NCK1P16333 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.48■□□□□ 0.87
NCK1P16333 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.48■□□□□ 0.87
NCK1P16333 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCK1P16333 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NCK1P16333 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.48■□□□□ 0.87
NCK1P16333 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCK1P16333 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCK1P16333 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.48■□□□□ 0.87
NCK1P16333 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCK1P16333 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCK1P16333 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
NCK1P16333 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCK1P16333 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCK1P16333 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCK1P16333 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCK1P16333 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NCK1P16333 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCK1P16333 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCK1P16333 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NCK1P16333 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCK1P16333 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCK1P16333 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCK1P16333 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NCK1P16333 DUX4L4-201ENST00000566884 1269 ntBASIC20.47■□□□□ 0.87
NCK1P16333 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.47■□□□□ 0.87
NCK1P16333 AC005703.6-201ENST00000623265 1329 ntBASIC20.47■□□□□ 0.87
NCK1P16333 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCK1P16333 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.47■□□□□ 0.87
NCK1P16333 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCK1P16333 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NCK1P16333 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCK1P16333 Z98882.1-201ENST00000622160 2253 ntBASIC20.46■□□□□ 0.87
NCK1P16333 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.46■□□□□ 0.87
NCK1P16333 MIR4508-201ENST00000584178 70 ntBASIC20.46■□□□□ 0.87
NCK1P16333 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCK1P16333 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCK1P16333 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
NCK1P16333 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCK1P16333 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCK1P16333 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCK1P16333 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NCK1P16333 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NCK1P16333 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.45■□□□□ 0.87
NCK1P16333 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCK1P16333 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCK1P16333 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.45■□□□□ 0.86
NCK1P16333 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.45■□□□□ 0.86
NCK1P16333 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCK1P16333 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCK1P16333 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NCK1P16333 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.45■□□□□ 0.86
NCK1P16333 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCK1P16333 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms