Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 MRP21YBL090W 534 nt5.12□□□□□ -1.59
TY1A-ER1P0CX71 CKA2YOR061W 1020 nt5.12□□□□□ -1.59
TY1A-ER1P0CX71 RPB5YBR154C 648 nt5.12□□□□□ -1.59
TY1A-ER1P0CX71 JJJ1YNL227C 1773 nt5.11□□□□□ -1.59
TY1A-ER1P0CX71 ARE2YNR019W 1929 nt5.11□□□□□ -1.59
TY1A-ER1P0CX71 DBF4YDR052C 2115 nt5.11□□□□□ -1.59
TY1A-ER1P0CX71 YDL032WYDL032W 312 nt5.11□□□□□ -1.59
TY1A-ER1P0CX71 VAM7YGL212W 951 nt5.11□□□□□ -1.59
TY1A-ER1P0CX71 MRPL44YMR225C 297 nt5.11□□□□□ -1.59
TY1A-ER1P0CX71 EOS1YNL080C 1101 nt5.11□□□□□ -1.59
TY1A-ER1P0CX71 ATG8YBL078C 354 nt5.11□□□□□ -1.59
TY1A-ER1P0CX71 CHK1YBR274W 1584 nt5.11□□□□□ -1.59
TY1A-ER1P0CX71 PDC1YLR044C 1692 nt5.11□□□□□ -1.59
TY1A-ER1P0CX71 GCD2YGR083C 1956 nt5.11□□□□□ -1.59
TY1A-ER1P0CX71 TSC13YDL015C 933 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 YDR053WYDR053W 396 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 MSW1YDR268W 1140 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 RAD30YDR419W 1899 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 IZH1YDR492W 951 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 YER067C-AYER067C-A 324 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 RPS25AYGR027C 327 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 MRPL9YGR220C 810 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 COX2Q0250 756 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 NTA1YJR062C 1374 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 UBX4YMR067C 1251 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 NGL2YMR285C 1548 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 GRX7YBR014C 612 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 CAF20YOR276W 486 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 VPS69YPR087W 321 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 YBR139WYBR139W 1527 nt5.1□□□□□ -1.59
TY1A-ER1P0CX71 ABZ1YNR033W 2364 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 CDC5YMR001C 2118 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 AMD2YDR242W 1650 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 SMF2YHR050W 1650 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 TVP15YDR100W 432 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 FIN1YDR130C 876 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 RPC37YKR025W 849 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 YAR047CYAR047C 321 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 RHO5YNL180C 996 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 MCK1YNL307C 1128 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 LEE1YPL054W 906 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 CTP1YBR291C 900 nt5.09□□□□□ -1.59
TY1A-ER1P0CX71 ERG1YGR175C 1491 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 GAS4YOL132W 1416 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 TRM11YOL124C 1302 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 snR5snR5 204 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 YCR050CYCR050C 309 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 IES5YER092W 378 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 FUR1YHR128W 651 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 SUP2tY(GUA)D 75 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 RPL16AYIL133C 600 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 SUP11tY(GUA)F1 75 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 SUP6tY(GUA)F2 75 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 SUP7tY(GUA)J1 75 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 SUP4tY(GUA)J2 75 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 SUP5tY(GUA)M1 75 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 SUP8tY(GUA)M2 75 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 SUP3tY(GUA)O 75 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 SOP4YJL192C 705 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 MTC2YKL098W 1074 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 VPH2YKL119C 648 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 YNL109WYNL109W 546 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 YBR012CYBR012C 420 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 RBL2YOR265W 321 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 CUR1YPR158W 759 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 MKS1YNL076W 1755 nt5.08□□□□□ -1.6
TY1A-ER1P0CX71 FRS2YFL022C 1512 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 CDC48YDL126C 2508 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 ARP4YJL081C 1470 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 ATG20YDL113C 1923 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 MCM4YPR019W 2802 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 ESF1YDR365C 1887 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 HXT5YHR096C 1779 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 KKQ8YKL168C 2175 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 ELO2YCR034W 1044 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 BMH2YDR099W 822 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 YGR018CYGR018C 330 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 POL12YBL035C 2118 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 IMP1YMR150C 573 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 YOR199WYOR199W 330 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 DSS4YPR017C 432 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 PBN1YCL052C 1251 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 ADF1YCL058W-A 342 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 MRH4YGL064C 1686 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 QDR3YBR043C 2070 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 GEM1YAL048C 1989 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 SUC2YIL162W 1599 nt5.07□□□□□ -1.6
TY1A-ER1P0CX71 SRP1YNL189W 1629 nt5.06□□□□□ -1.6
TY1A-ER1P0CX71 YCR064CYCR064C 411 nt5.06□□□□□ -1.6
TY1A-ER1P0CX71 RPS11AYDR025W 471 nt5.06□□□□□ -1.6
TY1A-ER1P0CX71 MET32YDR253C 576 nt5.06□□□□□ -1.6
TY1A-ER1P0CX71 ERP1YAR002C-A 660 nt5.06□□□□□ -1.6
TY1A-ER1P0CX71 MED11YMR112C 396 nt5.06□□□□□ -1.6
TY1A-ER1P0CX71 AGA1YNR044W 2178 nt5.06□□□□□ -1.6
TY1A-ER1P0CX71 CTS1YLR286C 1689 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 JEM1YJL073W 1938 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 LTV1YKL143W 1392 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 YBL005W-AYBL005W-A 1323 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 TRM8YDL201W 861 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 YHR130CYHR130C 336 nt5.05□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 43.4 ms