Protein–RNA interactions for Protein: P0CI26

TRIM49C, Tripartite motif-containing protein 49C, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49CP0CI26 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM49CP0CI26 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
TRIM49CP0CI26 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM49CP0CI26 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM49CP0CI26 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIM49CP0CI26 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM49CP0CI26 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM49CP0CI26 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIM49CP0CI26 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
TRIM49CP0CI26 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
TRIM49CP0CI26 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM49CP0CI26 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM49CP0CI26 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM49CP0CI26 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM49CP0CI26 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM49CP0CI26 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM49CP0CI26 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIM49CP0CI26 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.66■■□□□ 1.38
TRIM49CP0CI26 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM49CP0CI26 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM49CP0CI26 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM49CP0CI26 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM49CP0CI26 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM49CP0CI26 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM49CP0CI26 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.38
TRIM49CP0CI26 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49CP0CI26 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.64■■□□□ 1.37
TRIM49CP0CI26 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49CP0CI26 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49CP0CI26 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.64■■□□□ 1.37
TRIM49CP0CI26 AC106739.1-201ENST00000617035 715 ntBASIC23.64■■□□□ 1.37
TRIM49CP0CI26 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.64■■□□□ 1.37
TRIM49CP0CI26 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM49CP0CI26 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM49CP0CI26 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM49CP0CI26 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49CP0CI26 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49CP0CI26 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49CP0CI26 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49CP0CI26 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49CP0CI26 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM49CP0CI26 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM49CP0CI26 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.63■■□□□ 1.37
TRIM49CP0CI26 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIM49CP0CI26 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49CP0CI26 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM49CP0CI26 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TRIM49CP0CI26 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM49CP0CI26 AC092053.2-201ENST00000640557 1818 ntBASIC23.62■■□□□ 1.37
TRIM49CP0CI26 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TRIM49CP0CI26 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
TRIM49CP0CI26 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
TRIM49CP0CI26 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM49CP0CI26 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TRIM49CP0CI26 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TRIM49CP0CI26 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM49CP0CI26 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM49CP0CI26 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TRIM49CP0CI26 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM49CP0CI26 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM49CP0CI26 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM49CP0CI26 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
TRIM49CP0CI26 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM49CP0CI26 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM49CP0CI26 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
TRIM49CP0CI26 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM49CP0CI26 BX842568.3-201ENST00000418104 571 ntBASIC23.6■■□□□ 1.37
TRIM49CP0CI26 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.6■■□□□ 1.37
TRIM49CP0CI26 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM49CP0CI26 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.6■■□□□ 1.37
TRIM49CP0CI26 AC068587.7-201ENST00000641602 218 ntBASIC23.6■■□□□ 1.37
TRIM49CP0CI26 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM49CP0CI26 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM49CP0CI26 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM49CP0CI26 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM49CP0CI26 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 LINC00565-201ENST00000562710 2331 ntBASIC23.59■■□□□ 1.37
TRIM49CP0CI26 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49CP0CI26 AC010141.3-201ENST00000456659 717 ntBASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms