Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 PKD1P6-201ENST00000343738 4769 ntBASIC20.91■□□□□ 0.94
LINGO3P0C6S8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINGO3P0C6S8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LINGO3P0C6S8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINGO3P0C6S8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINGO3P0C6S8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LINGO3P0C6S8 AC239859.2-201ENST00000444165 318 ntBASIC20.9■□□□□ 0.94
LINGO3P0C6S8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.9■□□□□ 0.94
LINGO3P0C6S8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINGO3P0C6S8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINGO3P0C6S8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINGO3P0C6S8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINGO3P0C6S8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LINGO3P0C6S8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINGO3P0C6S8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINGO3P0C6S8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINGO3P0C6S8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 KRT125P-201ENST00000546827 989 ntBASIC20.89■□□□□ 0.93
LINGO3P0C6S8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.89■□□□□ 0.93
LINGO3P0C6S8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINGO3P0C6S8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 AC004448.1-201ENST00000458332 883 ntBASIC20.87■□□□□ 0.93
LINGO3P0C6S8 MIR4787-201ENST00000607364 84 ntBASIC20.87■□□□□ 0.93
LINGO3P0C6S8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINGO3P0C6S8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINGO3P0C6S8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.86■□□□□ 0.93
LINGO3P0C6S8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINGO3P0C6S8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.86■□□□□ 0.93
LINGO3P0C6S8 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.86■□□□□ 0.93
LINGO3P0C6S8 SNX5-217ENST00000606557 1087 ntBASIC20.86■□□□□ 0.93
LINGO3P0C6S8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINGO3P0C6S8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.86■□□□□ 0.93
LINGO3P0C6S8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINGO3P0C6S8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINGO3P0C6S8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
LINGO3P0C6S8 ALDH1A3-203ENST00000557963 1670 ntBASIC20.86■□□□□ 0.93
LINGO3P0C6S8 AL020996.1-203ENST00000536896 2307 ntBASIC20.86■□□□□ 0.93
LINGO3P0C6S8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 AC092028.1-203ENST00000608262 953 ntBASIC20.85■□□□□ 0.93
LINGO3P0C6S8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LINGO3P0C6S8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms