Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CD48P09326 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CD48P09326 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CD48P09326 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.62■■□□□ 1.21
CD48P09326 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.62■■□□□ 1.21
CD48P09326 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.62■■□□□ 1.21
CD48P09326 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.62■■□□□ 1.21
CD48P09326 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.62■■□□□ 1.21
CD48P09326 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CD48P09326 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CD48P09326 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CD48P09326 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.62■■□□□ 1.21
CD48P09326 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.62■■□□□ 1.21
CD48P09326 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CD48P09326 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.62■■□□□ 1.21
CD48P09326 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CD48P09326 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CD48P09326 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.61■■□□□ 1.21
CD48P09326 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CD48P09326 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CD48P09326 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CD48P09326 OR2I1P-207ENST00000453522 948 ntBASIC22.61■■□□□ 1.21
CD48P09326 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
CD48P09326 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CD48P09326 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CD48P09326 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CD48P09326 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CD48P09326 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.6■■□□□ 1.21
CD48P09326 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CD48P09326 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CD48P09326 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.6■■□□□ 1.21
CD48P09326 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.6■■□□□ 1.21
CD48P09326 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.6■■□□□ 1.21
CD48P09326 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CD48P09326 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CD48P09326 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CD48P09326 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CD48P09326 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CD48P09326 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CD48P09326 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CD48P09326 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.59■■□□□ 1.21
CD48P09326 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CD48P09326 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CD48P09326 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.59■■□□□ 1.21
CD48P09326 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
CD48P09326 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CD48P09326 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
CD48P09326 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CD48P09326 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CD48P09326 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.58■■□□□ 1.21
CD48P09326 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.58■■□□□ 1.21
CD48P09326 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CD48P09326 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CD48P09326 DUX4L19-201ENST00000557448 1267 ntBASIC22.58■■□□□ 1.21
CD48P09326 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CD48P09326 AL138724.1-201ENST00000606771 1088 ntBASIC22.58■■□□□ 1.21
CD48P09326 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.58■■□□□ 1.21
CD48P09326 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CD48P09326 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CD48P09326 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
CD48P09326 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
CD48P09326 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.57■■□□□ 1.2
CD48P09326 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CD48P09326 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CD48P09326 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CD48P09326 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CD48P09326 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.57■■□□□ 1.2
CD48P09326 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.57■■□□□ 1.2
CD48P09326 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CD48P09326 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.57■■□□□ 1.2
CD48P09326 AC136469.2-201ENST00000623944 1028 ntBASIC22.57■■□□□ 1.2
CD48P09326 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CD48P09326 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CD48P09326 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CD48P09326 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CD48P09326 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CD48P09326 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
CD48P09326 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CD48P09326 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CD48P09326 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CD48P09326 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CD48P09326 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CD48P09326 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CD48P09326 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CD48P09326 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CD48P09326 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CD48P09326 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CD48P09326 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.55■■□□□ 1.2
CD48P09326 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CD48P09326 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CD48P09326 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CD48P09326 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.55■■□□□ 1.2
CD48P09326 AC011298.3-201ENST00000615796 283 ntBASIC22.55■■□□□ 1.2
CD48P09326 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.55■■□□□ 1.2
CD48P09326 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.55■■□□□ 1.2
CD48P09326 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CD48P09326 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD48P09326 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CD48P09326 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CD48P09326 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms