Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ERCC1P07992 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 MIR935-201ENST00000401179 91 ntBASIC19.19■□□□□ 0.66
ERCC1P07992 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.19■□□□□ 0.66
ERCC1P07992 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.19■□□□□ 0.66
ERCC1P07992 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
ERCC1P07992 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.19■□□□□ 0.66
ERCC1P07992 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC1P07992 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.19■□□□□ 0.66
ERCC1P07992 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC1P07992 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC1P07992 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC1P07992 AC144652.1-201ENST00000609974 1624 ntBASIC19.18■□□□□ 0.66
ERCC1P07992 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
ERCC1P07992 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC1P07992 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.18■□□□□ 0.66
ERCC1P07992 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.18■□□□□ 0.66
ERCC1P07992 AC011298.3-201ENST00000615796 283 ntBASIC19.18■□□□□ 0.66
ERCC1P07992 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC1P07992 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC1P07992 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC1P07992 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC1P07992 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERCC1P07992 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ERCC1P07992 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ERCC1P07992 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ERCC1P07992 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.17■□□□□ 0.66
ERCC1P07992 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.17■□□□□ 0.66
ERCC1P07992 AC092053.2-201ENST00000640557 1818 ntBASIC19.17■□□□□ 0.66
ERCC1P07992 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ERCC1P07992 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ERCC1P07992 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERCC1P07992 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ERCC1P07992 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ERCC1P07992 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC1P07992 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC1P07992 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.16■□□□□ 0.66
ERCC1P07992 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.16■□□□□ 0.66
ERCC1P07992 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
ERCC1P07992 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.16■□□□□ 0.66
ERCC1P07992 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC1P07992 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC1P07992 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.16■□□□□ 0.66
ERCC1P07992 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC1P07992 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ERCC1P07992 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERCC1P07992 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.16■□□□□ 0.66
ERCC1P07992 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC1P07992 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC1P07992 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC1P07992 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC1P07992 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC1P07992 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC1P07992 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.15■□□□□ 0.66
ERCC1P07992 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC1P07992 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC1P07992 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.15■□□□□ 0.66
ERCC1P07992 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC1P07992 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ERCC1P07992 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC1P07992 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ERCC1P07992 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.14■□□□□ 0.66
ERCC1P07992 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC1P07992 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ERCC1P07992 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC1P07992 SERBP1P1-201ENST00000396021 1160 ntBASIC19.14■□□□□ 0.65
ERCC1P07992 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC1P07992 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC1P07992 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ERCC1P07992 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC1P07992 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC1P07992 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC1P07992 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC1P07992 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.13■□□□□ 0.65
ERCC1P07992 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC1P07992 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC1P07992 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC1P07992 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms