Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CAPNS1P04632 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPNS1P04632 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPNS1P04632 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPNS1P04632 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CAPNS1P04632 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPNS1P04632 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.61■■□□□ 1.05
CAPNS1P04632 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CAPNS1P04632 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPNS1P04632 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPNS1P04632 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPNS1P04632 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.61■■□□□ 1.05
CAPNS1P04632 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.61■■□□□ 1.05
CAPNS1P04632 AC012414.1-201ENST00000556676 535 ntBASIC21.61■■□□□ 1.05
CAPNS1P04632 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
CAPNS1P04632 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.61■■□□□ 1.05
CAPNS1P04632 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPNS1P04632 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.61■■□□□ 1.05
CAPNS1P04632 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CAPNS1P04632 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CAPNS1P04632 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPNS1P04632 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPNS1P04632 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPNS1P04632 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.6■■□□□ 1.05
CAPNS1P04632 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CAPNS1P04632 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPNS1P04632 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.6■■□□□ 1.05
CAPNS1P04632 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CAPNS1P04632 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.6■■□□□ 1.05
CAPNS1P04632 AL354811.1-201ENST00000610286 706 ntBASIC21.6■■□□□ 1.05
CAPNS1P04632 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPNS1P04632 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.6■■□□□ 1.05
CAPNS1P04632 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CAPNS1P04632 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPNS1P04632 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPNS1P04632 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPNS1P04632 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
CAPNS1P04632 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.59■■□□□ 1.05
CAPNS1P04632 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CAPNS1P04632 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.59■■□□□ 1.05
CAPNS1P04632 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.59■■□□□ 1.05
CAPNS1P04632 AC073111.5-205ENST00000641717 521 ntBASIC21.59■■□□□ 1.05
CAPNS1P04632 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CAPNS1P04632 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CAPNS1P04632 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CAPNS1P04632 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CAPNS1P04632 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CAPNS1P04632 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CAPNS1P04632 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.58■■□□□ 1.05
CAPNS1P04632 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CAPNS1P04632 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.58■■□□□ 1.05
CAPNS1P04632 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.58■■□□□ 1.05
CAPNS1P04632 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CAPNS1P04632 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CAPNS1P04632 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CAPNS1P04632 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CAPNS1P04632 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CAPNS1P04632 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPNS1P04632 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPNS1P04632 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPNS1P04632 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CAPNS1P04632 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPNS1P04632 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.57■■□□□ 1.04
CAPNS1P04632 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.57■■□□□ 1.04
CAPNS1P04632 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.57■■□□□ 1.04
CAPNS1P04632 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.57■■□□□ 1.04
CAPNS1P04632 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.57■■□□□ 1.04
CAPNS1P04632 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CAPNS1P04632 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CAPNS1P04632 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPNS1P04632 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CAPNS1P04632 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.56■■□□□ 1.04
CAPNS1P04632 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CAPNS1P04632 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPNS1P04632 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPNS1P04632 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPNS1P04632 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPNS1P04632 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.56■■□□□ 1.04
CAPNS1P04632 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPNS1P04632 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPNS1P04632 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPNS1P04632 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPNS1P04632 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.55■■□□□ 1.04
CAPNS1P04632 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPNS1P04632 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPNS1P04632 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.55■■□□□ 1.04
CAPNS1P04632 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.55■■□□□ 1.04
CAPNS1P04632 AC009086.3-201ENST00000623486 1008 ntBASIC21.55■■□□□ 1.04
CAPNS1P04632 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CAPNS1P04632 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPNS1P04632 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.55■■□□□ 1.04
CAPNS1P04632 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.55■■□□□ 1.04
CAPNS1P04632 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CAPNS1P04632 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.54■■□□□ 1.04
CAPNS1P04632 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.54■■□□□ 1.04
CAPNS1P04632 LINC02228-203ENST00000641970 1355 ntBASIC21.54■■□□□ 1.04
CAPNS1P04632 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.54■■□□□ 1.04
CAPNS1P04632 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.54■■□□□ 1.04
CAPNS1P04632 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.54■■□□□ 1.04
CAPNS1P04632 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms