Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LCATP04180 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
LCATP04180 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.98■□□□□ 0.63
LCATP04180 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LCATP04180 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LCATP04180 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.98■□□□□ 0.63
LCATP04180 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.98■□□□□ 0.63
LCATP04180 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
LCATP04180 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LCATP04180 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LCATP04180 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.98■□□□□ 0.63
LCATP04180 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
LCATP04180 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LCATP04180 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LCATP04180 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LCATP04180 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LCATP04180 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.97■□□□□ 0.63
LCATP04180 SERBP1P1-201ENST00000396021 1160 ntBASIC18.97■□□□□ 0.63
LCATP04180 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.97■□□□□ 0.63
LCATP04180 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.97■□□□□ 0.63
LCATP04180 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCATP04180 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.97■□□□□ 0.63
LCATP04180 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCATP04180 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LCATP04180 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.97■□□□□ 0.63
LCATP04180 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.97■□□□□ 0.63
LCATP04180 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LCATP04180 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCATP04180 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCATP04180 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCATP04180 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCATP04180 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.96■□□□□ 0.63
LCATP04180 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCATP04180 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
LCATP04180 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.96■□□□□ 0.63
LCATP04180 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.96■□□□□ 0.63
LCATP04180 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCATP04180 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LCATP04180 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LCATP04180 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCATP04180 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LCATP04180 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LCATP04180 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCATP04180 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LCATP04180 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.95■□□□□ 0.62
LCATP04180 AC139530.1-201ENST00000575312 1977 ntBASIC18.95■□□□□ 0.62
LCATP04180 AC092053.2-201ENST00000640557 1818 ntBASIC18.95■□□□□ 0.62
LCATP04180 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.95■□□□□ 0.62
LCATP04180 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LCATP04180 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCATP04180 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LCATP04180 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LCATP04180 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCATP04180 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
LCATP04180 AL138724.1-201ENST00000606771 1088 ntBASIC18.95■□□□□ 0.62
LCATP04180 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LCATP04180 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LCATP04180 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.95■□□□□ 0.62
LCATP04180 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LCATP04180 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCATP04180 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.95■□□□□ 0.62
LCATP04180 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCATP04180 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LCATP04180 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCATP04180 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCATP04180 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LCATP04180 AC137767.1-201ENST00000602918 1920 ntBASIC18.94■□□□□ 0.62
LCATP04180 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LCATP04180 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LCATP04180 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LCATP04180 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LCATP04180 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.94■□□□□ 0.62
LCATP04180 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LCATP04180 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.94■□□□□ 0.62
LCATP04180 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LCATP04180 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LCATP04180 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LCATP04180 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.94■□□□□ 0.62
LCATP04180 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LCATP04180 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LCATP04180 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LCATP04180 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LCATP04180 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LCATP04180 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LCATP04180 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
LCATP04180 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LCATP04180 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.93■□□□□ 0.62
LCATP04180 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LCATP04180 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.93■□□□□ 0.62
LCATP04180 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.93■□□□□ 0.62
LCATP04180 CA15P2-201ENST00000611168 834 ntBASIC18.93■□□□□ 0.62
LCATP04180 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCATP04180 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
LCATP04180 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCATP04180 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCATP04180 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.93■□□□□ 0.62
LCATP04180 AC008406.3-201ENST00000620001 1374 ntBASIC18.93■□□□□ 0.62
LCATP04180 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCATP04180 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LCATP04180 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms