Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB1P01920 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB1P01920 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB1P01920 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB1P01920 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.8■□□□□ 0.6
HLA-DQB1P01920 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HLA-DQB1P01920 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB1P01920 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB1P01920 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DQB1P01920 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DQB1P01920 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DQB1P01920 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 AC144652.1-201ENST00000609974 1624 ntBASIC18.79■□□□□ 0.6
HLA-DQB1P01920 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DQB1P01920 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB1P01920 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB1P01920 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DQB1P01920 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.77■□□□□ 0.6
HLA-DQB1P01920 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DQB1P01920 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HLA-DQB1P01920 RARRES2P2-201ENST00000394842 485 ntBASIC18.77■□□□□ 0.6
HLA-DQB1P01920 U85056.1-201ENST00000616429 682 ntBASIC18.77■□□□□ 0.6
HLA-DQB1P01920 AC129492.7-201ENST00000622992 756 ntBASIC18.77■□□□□ 0.6
HLA-DQB1P01920 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB1P01920 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB1P01920 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB1P01920 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
HLA-DQB1P01920 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-DQB1P01920 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB1P01920 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HLA-DQB1P01920 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB1P01920 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DQB1P01920 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-DQB1P01920 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-DQB1P01920 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HLA-DQB1P01920 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-DQB1P01920 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB1P01920 AL391422.3-201ENST00000603791 2761 ntBASIC18.76■□□□□ 0.59
HLA-DQB1P01920 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 FEM1AP1-201ENST00000431297 1995 ntBASIC18.75■□□□□ 0.59
HLA-DQB1P01920 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 AC004448.1-201ENST00000458332 883 ntBASIC18.75■□□□□ 0.59
HLA-DQB1P01920 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.75■□□□□ 0.59
HLA-DQB1P01920 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DQB1P01920 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB1P01920 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DQB1P01920 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.73■□□□□ 0.59
HLA-DQB1P01920 AF131216.4-201ENST00000638924 1588 ntBASIC18.73■□□□□ 0.59
HLA-DQB1P01920 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms