Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.26■■□□□ 1.15
MT-CO1P00395 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-CO1P00395 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.26■■□□□ 1.15
MT-CO1P00395 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.26■■□□□ 1.15
MT-CO1P00395 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-CO1P00395 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MT-CO1P00395 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.26■■□□□ 1.15
MT-CO1P00395 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.26■■□□□ 1.15
MT-CO1P00395 MIR6084-201ENST00000622012 110 ntBASIC22.26■■□□□ 1.15
MT-CO1P00395 AC068587.7-201ENST00000641602 218 ntBASIC22.26■■□□□ 1.15
MT-CO1P00395 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
MT-CO1P00395 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
MT-CO1P00395 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.25■■□□□ 1.15
MT-CO1P00395 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
MT-CO1P00395 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MT-CO1P00395 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.24■■□□□ 1.15
MT-CO1P00395 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-CO1P00395 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.24■■□□□ 1.15
MT-CO1P00395 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-CO1P00395 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-CO1P00395 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MT-CO1P00395 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.24■■□□□ 1.15
MT-CO1P00395 AC097381.1-201ENST00000429019 1296 ntBASIC22.24■■□□□ 1.15
MT-CO1P00395 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.24■■□□□ 1.15
MT-CO1P00395 AC010141.3-201ENST00000456659 717 ntBASIC22.24■■□□□ 1.15
MT-CO1P00395 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.24■■□□□ 1.15
MT-CO1P00395 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.24■■□□□ 1.15
MT-CO1P00395 AC087623.3-201ENST00000607047 1098 ntBASIC22.24■■□□□ 1.15
MT-CO1P00395 MIR6821-201ENST00000617625 74 ntBASIC22.24■■□□□ 1.15
MT-CO1P00395 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-CO1P00395 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MT-CO1P00395 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
MT-CO1P00395 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MT-CO1P00395 LINC01960-201ENST00000563759 1884 ntBASIC22.24■■□□□ 1.15
MT-CO1P00395 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
MT-CO1P00395 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.23■■□□□ 1.15
MT-CO1P00395 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.23■■□□□ 1.15
MT-CO1P00395 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-CO1P00395 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
MT-CO1P00395 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.23■■□□□ 1.15
MT-CO1P00395 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-CO1P00395 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.23■■□□□ 1.15
MT-CO1P00395 AC012414.1-201ENST00000556676 535 ntBASIC22.23■■□□□ 1.15
MT-CO1P00395 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.23■■□□□ 1.15
MT-CO1P00395 AL358852.1-201ENST00000623174 1268 ntBASIC22.23■■□□□ 1.15
MT-CO1P00395 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
MT-CO1P00395 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
MT-CO1P00395 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
MT-CO1P00395 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
MT-CO1P00395 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
MT-CO1P00395 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MT-CO1P00395 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
MT-CO1P00395 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
MT-CO1P00395 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
MT-CO1P00395 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MT-CO1P00395 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.22■■□□□ 1.15
MT-CO1P00395 AC105233.4-201ENST00000642045 216 ntBASIC22.22■■□□□ 1.15
MT-CO1P00395 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
MT-CO1P00395 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
MT-CO1P00395 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
MT-CO1P00395 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MT-CO1P00395 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.22■■□□□ 1.15
MT-CO1P00395 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
MT-CO1P00395 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.22■■□□□ 1.15
MT-CO1P00395 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.21■■□□□ 1.15
MT-CO1P00395 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.21■■□□□ 1.15
MT-CO1P00395 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-CO1P00395 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MT-CO1P00395 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.21■■□□□ 1.15
MT-CO1P00395 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-CO1P00395 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-CO1P00395 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-CO1P00395 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.21■■□□□ 1.15
MT-CO1P00395 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MT-CO1P00395 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.21■■□□□ 1.15
MT-CO1P00395 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
MT-CO1P00395 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
MT-CO1P00395 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
MT-CO1P00395 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MT-CO1P00395 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-CO1P00395 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-CO1P00395 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.2■■□□□ 1.14
MT-CO1P00395 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.2■■□□□ 1.14
MT-CO1P00395 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.2■■□□□ 1.14
MT-CO1P00395 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.2■■□□□ 1.14
MT-CO1P00395 AL354811.1-201ENST00000610286 706 ntBASIC22.2■■□□□ 1.14
MT-CO1P00395 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MT-CO1P00395 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms