Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
POLR1AO95602 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
POLR1AO95602 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC31.92■■■□□ 2.7
POLR1AO95602 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC31.92■■■□□ 2.7
POLR1AO95602 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC31.92■■■□□ 2.7
POLR1AO95602 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.92■■■□□ 2.7
POLR1AO95602 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC31.92■■■□□ 2.7
POLR1AO95602 TBCB-214ENST00000629269 413 ntTSL 5 BASIC31.92■■■□□ 2.7
POLR1AO95602 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
POLR1AO95602 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
POLR1AO95602 DUX4L16-201ENST00000555130 1264 ntBASIC31.92■■■□□ 2.7
POLR1AO95602 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
POLR1AO95602 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
POLR1AO95602 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
POLR1AO95602 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
POLR1AO95602 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
POLR1AO95602 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC31.91■■■□□ 2.7
POLR1AO95602 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC31.91■■■□□ 2.7
POLR1AO95602 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.91■■■□□ 2.7
POLR1AO95602 BX005040.4-201ENST00000637145 1518 ntBASIC31.91■■■□□ 2.7
POLR1AO95602 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC31.91■■■□□ 2.7
POLR1AO95602 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC31.9■■■□□ 2.7
POLR1AO95602 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC31.9■■■□□ 2.7
POLR1AO95602 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC31.9■■■□□ 2.7
POLR1AO95602 RARA-203ENST00000394086 2008 ntTSL 2 BASIC31.9■■■□□ 2.7
POLR1AO95602 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
POLR1AO95602 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
POLR1AO95602 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
POLR1AO95602 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC31.89■■■□□ 2.7
POLR1AO95602 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.89■■■□□ 2.7
POLR1AO95602 ARL16-209ENST00000573715 763 ntTSL 3 BASIC31.89■■■□□ 2.7
POLR1AO95602 ARL16-211ENST00000576135 694 ntTSL 3 BASIC31.89■■■□□ 2.7
POLR1AO95602 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC31.89■■■□□ 2.7
POLR1AO95602 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
POLR1AO95602 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
POLR1AO95602 AC098590.1-201ENST00000468126 897 ntBASIC31.89■■■□□ 2.69
POLR1AO95602 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC31.89■■■□□ 2.69
POLR1AO95602 UBE2DNL-204ENST00000602536 740 ntBASIC31.89■■■□□ 2.69
POLR1AO95602 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
POLR1AO95602 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
POLR1AO95602 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
POLR1AO95602 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC31.88■■■□□ 2.69
POLR1AO95602 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC31.88■■■□□ 2.69
POLR1AO95602 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC31.88■■■□□ 2.69
POLR1AO95602 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
POLR1AO95602 POU5F1P3-201ENST00000428824 1078 ntBASIC31.88■■■□□ 2.69
POLR1AO95602 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC31.88■■■□□ 2.69
POLR1AO95602 RPS2P52-201ENST00000469610 820 ntBASIC31.88■■■□□ 2.69
POLR1AO95602 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.88■■■□□ 2.69
POLR1AO95602 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC31.88■■■□□ 2.69
POLR1AO95602 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
POLR1AO95602 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
POLR1AO95602 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
POLR1AO95602 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31.87■■■□□ 2.69
POLR1AO95602 AC083906.2-201ENST00000511578 360 ntBASIC31.87■■■□□ 2.69
POLR1AO95602 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.87■■■□□ 2.69
POLR1AO95602 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC31.87■■■□□ 2.69
POLR1AO95602 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC31.87■■■□□ 2.69
POLR1AO95602 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
POLR1AO95602 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
POLR1AO95602 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
POLR1AO95602 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
POLR1AO95602 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC31.86■■■□□ 2.69
POLR1AO95602 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.86■■■□□ 2.69
POLR1AO95602 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
POLR1AO95602 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
POLR1AO95602 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC31.86■■■□□ 2.69
POLR1AO95602 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC31.86■■■□□ 2.69
POLR1AO95602 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
POLR1AO95602 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC31.86■■■□□ 2.69
POLR1AO95602 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
POLR1AO95602 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
POLR1AO95602 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
POLR1AO95602 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
POLR1AO95602 AC005181.1-201ENST00000604782 1256 ntBASIC31.85■■■□□ 2.69
POLR1AO95602 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
POLR1AO95602 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
POLR1AO95602 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
POLR1AO95602 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC31.84■■■□□ 2.69
POLR1AO95602 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
POLR1AO95602 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
POLR1AO95602 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
POLR1AO95602 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC31.84■■■□□ 2.69
POLR1AO95602 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC31.84■■■□□ 2.69
POLR1AO95602 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
POLR1AO95602 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC31.84■■■□□ 2.69
POLR1AO95602 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
POLR1AO95602 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.83■■■□□ 2.69
POLR1AO95602 CPT2-209ENST00000636935 803 ntTSL 5 BASIC31.83■■■□□ 2.69
POLR1AO95602 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC31.83■■■□□ 2.69
POLR1AO95602 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
POLR1AO95602 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC31.83■■■□□ 2.69
POLR1AO95602 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC31.83■■■□□ 2.69
POLR1AO95602 AC073210.2-201ENST00000430369 194 ntBASIC31.83■■■□□ 2.69
POLR1AO95602 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
POLR1AO95602 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC31.83■■■□□ 2.69
POLR1AO95602 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
POLR1AO95602 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
POLR1AO95602 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC31.82■■■□□ 2.68
POLR1AO95602 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms