Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.19■□□□□ 0.5
ABCA1O95477 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.19■□□□□ 0.5
ABCA1O95477 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ABCA1O95477 TSPY20P-201ENST00000450910 630 ntBASIC18.19■□□□□ 0.5
ABCA1O95477 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ABCA1O95477 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCA1O95477 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCA1O95477 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.19■□□□□ 0.5
ABCA1O95477 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
ABCA1O95477 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ABCA1O95477 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ABCA1O95477 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.18■□□□□ 0.5
ABCA1O95477 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ABCA1O95477 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.18■□□□□ 0.5
ABCA1O95477 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCA1O95477 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCA1O95477 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.18■□□□□ 0.5
ABCA1O95477 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ABCA1O95477 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.18■□□□□ 0.5
ABCA1O95477 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ABCA1O95477 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.18■□□□□ 0.5
ABCA1O95477 DUX4L4-201ENST00000566884 1269 ntBASIC18.18■□□□□ 0.5
ABCA1O95477 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.18■□□□□ 0.5
ABCA1O95477 TMEM191A-211ENST00000637163 1067 ntBASIC18.18■□□□□ 0.5
ABCA1O95477 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCA1O95477 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ABCA1O95477 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCA1O95477 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
ABCA1O95477 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCA1O95477 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ABCA1O95477 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ABCA1O95477 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.18■□□□□ 0.5
ABCA1O95477 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ABCA1O95477 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ABCA1O95477 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCA1O95477 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ABCA1O95477 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
ABCA1O95477 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCA1O95477 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.17■□□□□ 0.5
ABCA1O95477 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.17■□□□□ 0.5
ABCA1O95477 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCA1O95477 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ABCA1O95477 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCA1O95477 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.16■□□□□ 0.5
ABCA1O95477 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.16■□□□□ 0.5
ABCA1O95477 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCA1O95477 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCA1O95477 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ABCA1O95477 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.16■□□□□ 0.5
ABCA1O95477 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ABCA1O95477 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCA1O95477 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ABCA1O95477 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.16■□□□□ 0.5
ABCA1O95477 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCA1O95477 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ABCA1O95477 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.16■□□□□ 0.5
ABCA1O95477 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.16■□□□□ 0.5
ABCA1O95477 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.16■□□□□ 0.5
ABCA1O95477 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ABCA1O95477 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCA1O95477 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ABCA1O95477 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCA1O95477 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ABCA1O95477 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.15■□□□□ 0.5
ABCA1O95477 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCA1O95477 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ABCA1O95477 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCA1O95477 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCA1O95477 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCA1O95477 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ABCA1O95477 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.15■□□□□ 0.5
ABCA1O95477 CD99P1-205ENST00000527459 561 ntBASIC18.15■□□□□ 0.5
ABCA1O95477 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ABCA1O95477 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ABCA1O95477 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCA1O95477 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
ABCA1O95477 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ABCA1O95477 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ABCA1O95477 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ABCA1O95477 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCA1O95477 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCA1O95477 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.14■□□□□ 0.49
ABCA1O95477 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCA1O95477 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCA1O95477 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.14■□□□□ 0.49
ABCA1O95477 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.14■□□□□ 0.49
ABCA1O95477 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.14■□□□□ 0.49
ABCA1O95477 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.14■□□□□ 0.49
ABCA1O95477 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCA1O95477 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ABCA1O95477 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCA1O95477 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCA1O95477 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ABCA1O95477 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ABCA1O95477 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.14■□□□□ 0.49
ABCA1O95477 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.14■□□□□ 0.49
ABCA1O95477 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.14■□□□□ 0.49
ABCA1O95477 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ABCA1O95477 C9orf163-202ENST00000624034 2573 ntBASIC18.13■□□□□ 0.49
ABCA1O95477 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms