Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
USH2AO75445 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC9.88□□□□□ -0.83
USH2AO75445 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
USH2AO75445 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC9.88□□□□□ -0.83
USH2AO75445 EI24-211ENST00000534546 1544 ntTSL 2 BASIC9.88□□□□□ -0.83
USH2AO75445 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC9.88□□□□□ -0.83
USH2AO75445 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 PARP1-202ENST00000366792 553 ntTSL 3 BASIC9.88□□□□□ -0.83
USH2AO75445 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
USH2AO75445 MIR718-201ENST00000390190 70 ntBASIC9.88□□□□□ -0.83
USH2AO75445 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC9.88□□□□□ -0.83
USH2AO75445 AL359736.2-201ENST00000621992 437 ntBASIC9.88□□□□□ -0.83
USH2AO75445 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
USH2AO75445 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC9.87□□□□□ -0.83
USH2AO75445 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 BX276092.2-201ENST00000417668 665 ntBASIC9.87□□□□□ -0.83
USH2AO75445 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
USH2AO75445 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC9.87□□□□□ -0.83
USH2AO75445 AC010536.3-201ENST00000620306 533 ntBASIC9.87□□□□□ -0.83
USH2AO75445 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 AP001160.3-201ENST00000601484 763 ntBASIC9.87□□□□□ -0.83
USH2AO75445 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC9.87□□□□□ -0.83
USH2AO75445 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC9.87□□□□□ -0.83
USH2AO75445 AC007322.4-201ENST00000509611 723 ntBASIC9.87□□□□□ -0.83
USH2AO75445 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC9.87□□□□□ -0.83
USH2AO75445 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
USH2AO75445 AC068338.2-201ENST00000563278 1430 ntBASIC9.87□□□□□ -0.83
USH2AO75445 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
USH2AO75445 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC9.87□□□□□ -0.83
USH2AO75445 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
USH2AO75445 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC9.86□□□□□ -0.83
USH2AO75445 AL121894.2-201ENST00000602977 491 ntBASIC9.86□□□□□ -0.83
USH2AO75445 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
USH2AO75445 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
USH2AO75445 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC9.86□□□□□ -0.83
USH2AO75445 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC9.86□□□□□ -0.83
USH2AO75445 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC9.86□□□□□ -0.83
USH2AO75445 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC9.86□□□□□ -0.83
USH2AO75445 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
USH2AO75445 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
USH2AO75445 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
USH2AO75445 ARMC10P1-201ENST00000313754 855 ntBASIC9.86□□□□□ -0.83
USH2AO75445 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC9.86□□□□□ -0.83
USH2AO75445 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC9.86□□□□□ -0.83
USH2AO75445 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
USH2AO75445 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
USH2AO75445 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
USH2AO75445 AC091874.3-201ENST00000512672 1195 ntBASIC9.86□□□□□ -0.83
USH2AO75445 RN7SL850P-201ENST00000579959 291 ntBASIC9.86□□□□□ -0.83
USH2AO75445 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC9.85□□□□□ -0.83
USH2AO75445 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC9.85□□□□□ -0.83
USH2AO75445 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC9.85□□□□□ -0.83
USH2AO75445 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC9.85□□□□□ -0.83
USH2AO75445 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC9.85□□□□□ -0.83
USH2AO75445 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
USH2AO75445 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 HLA-L-211ENST00000482052 1765 ntBASIC9.85□□□□□ -0.83
USH2AO75445 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC9.85□□□□□ -0.83
USH2AO75445 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
USH2AO75445 AC233263.1-201ENST00000578059 224 ntBASIC9.85□□□□□ -0.83
USH2AO75445 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC9.84□□□□□ -0.83
USH2AO75445 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 C1QBPP2-201ENST00000528754 825 ntBASIC9.84□□□□□ -0.83
USH2AO75445 PPOX-219ENST00000544598 813 ntTSL 2 BASIC9.84□□□□□ -0.83
USH2AO75445 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
USH2AO75445 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
USH2AO75445 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC9.84□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms