Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.84■□□□□ 0.29
ZNF253O75346 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
ZNF253O75346 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF253O75346 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF253O75346 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF253O75346 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ZNF253O75346 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF253O75346 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
ZNF253O75346 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
ZNF253O75346 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
ZNF253O75346 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF253O75346 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF253O75346 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF253O75346 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF253O75346 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.83■□□□□ 0.29
ZNF253O75346 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
ZNF253O75346 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF253O75346 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF253O75346 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF253O75346 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF253O75346 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF253O75346 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF253O75346 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF253O75346 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ZNF253O75346 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF253O75346 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF253O75346 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF253O75346 FP325331.1-202ENST00000623531 1380 ntBASIC16.83■□□□□ 0.28
ZNF253O75346 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF253O75346 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
ZNF253O75346 AC139530.1-201ENST00000575312 1977 ntBASIC16.82■□□□□ 0.28
ZNF253O75346 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF253O75346 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF253O75346 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF253O75346 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF253O75346 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZNF253O75346 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF253O75346 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF253O75346 AC137630.3-201ENST00000607245 391 ntBASIC16.82■□□□□ 0.28
ZNF253O75346 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF253O75346 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF253O75346 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF253O75346 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF253O75346 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ZNF253O75346 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZNF253O75346 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ZNF253O75346 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.81■□□□□ 0.28
ZNF253O75346 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
ZNF253O75346 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ZNF253O75346 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ZNF253O75346 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 LINC01529-204ENST00000636474 1715 ntBASIC16.81■□□□□ 0.28
ZNF253O75346 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF253O75346 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZNF253O75346 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.81■□□□□ 0.28
ZNF253O75346 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF253O75346 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF253O75346 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF253O75346 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF253O75346 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF253O75346 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF253O75346 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF253O75346 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF253O75346 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF253O75346 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.8■□□□□ 0.28
ZNF253O75346 MIR6722-201ENST00000617286 78 ntBASIC16.8■□□□□ 0.28
ZNF253O75346 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.8■□□□□ 0.28
ZNF253O75346 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ZNF253O75346 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.8■□□□□ 0.28
ZNF253O75346 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF253O75346 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF253O75346 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZNF253O75346 C11orf96-202ENST00000528572 1834 ntBASIC16.8■□□□□ 0.28
ZNF253O75346 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.79■□□□□ 0.28
ZNF253O75346 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ZNF253O75346 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF253O75346 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF253O75346 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF253O75346 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ZNF253O75346 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF253O75346 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF253O75346 AC005703.6-201ENST00000623265 1329 ntBASIC16.79■□□□□ 0.28
ZNF253O75346 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
ZNF253O75346 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF253O75346 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF253O75346 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.79■□□□□ 0.28
ZNF253O75346 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF253O75346 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ZNF253O75346 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms