Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.4■□□□□ 0.86
PRAMEF2O60811 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF2O60811 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.4■□□□□ 0.86
PRAMEF2O60811 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PRAMEF2O60811 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF2O60811 IGHV3-19-201ENST00000521488 291 ntBASIC20.4■□□□□ 0.86
PRAMEF2O60811 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.4■□□□□ 0.86
PRAMEF2O60811 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEF2O60811 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.4■□□□□ 0.86
PRAMEF2O60811 AC068587.7-201ENST00000641602 218 ntBASIC20.4■□□□□ 0.86
PRAMEF2O60811 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PRAMEF2O60811 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
PRAMEF2O60811 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEF2O60811 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
PRAMEF2O60811 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.39■□□□□ 0.86
PRAMEF2O60811 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEF2O60811 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEF2O60811 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF2O60811 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.39■□□□□ 0.85
PRAMEF2O60811 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.39■□□□□ 0.85
PRAMEF2O60811 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF2O60811 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.39■□□□□ 0.85
PRAMEF2O60811 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.39■□□□□ 0.85
PRAMEF2O60811 AL031602.1-201ENST00000633169 911 ntBASIC20.39■□□□□ 0.85
PRAMEF2O60811 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PRAMEF2O60811 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PRAMEF2O60811 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
PRAMEF2O60811 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.39■□□□□ 0.85
PRAMEF2O60811 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF2O60811 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF2O60811 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF2O60811 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF2O60811 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.38■□□□□ 0.85
PRAMEF2O60811 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PRAMEF2O60811 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.38■□□□□ 0.85
PRAMEF2O60811 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF2O60811 AC010525.1-201ENST00000585559 441 ntBASIC20.38■□□□□ 0.85
PRAMEF2O60811 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
PRAMEF2O60811 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.38■□□□□ 0.85
PRAMEF2O60811 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PRAMEF2O60811 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PRAMEF2O60811 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF2O60811 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PRAMEF2O60811 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF2O60811 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PRAMEF2O60811 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF2O60811 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF2O60811 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PRAMEF2O60811 AC087742.1-201ENST00000575880 1738 ntBASIC20.37■□□□□ 0.85
PRAMEF2O60811 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF2O60811 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF2O60811 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.37■□□□□ 0.85
PRAMEF2O60811 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF2O60811 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PRAMEF2O60811 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PRAMEF2O60811 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PRAMEF2O60811 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF2O60811 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF2O60811 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF2O60811 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.36■□□□□ 0.85
PRAMEF2O60811 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.36■□□□□ 0.85
PRAMEF2O60811 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF2O60811 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.36■□□□□ 0.85
PRAMEF2O60811 AC087239.1-201ENST00000622671 572 ntBASIC20.36■□□□□ 0.85
PRAMEF2O60811 AL358852.1-201ENST00000623174 1268 ntBASIC20.36■□□□□ 0.85
PRAMEF2O60811 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PRAMEF2O60811 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PRAMEF2O60811 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PRAMEF2O60811 AC233723.2-201ENST00000623798 2106 ntBASIC20.36■□□□□ 0.85
PRAMEF2O60811 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF2O60811 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF2O60811 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PRAMEF2O60811 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.36■□□□□ 0.85
PRAMEF2O60811 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF2O60811 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF2O60811 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF2O60811 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF2O60811 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF2O60811 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF2O60811 YBX1P1-201ENST00000445822 960 ntBASIC20.35■□□□□ 0.85
PRAMEF2O60811 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.35■□□□□ 0.85
PRAMEF2O60811 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.35■□□□□ 0.85
PRAMEF2O60811 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF2O60811 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.35■□□□□ 0.85
PRAMEF2O60811 AC127496.7-201ENST00000625110 1798 ntBASIC20.35■□□□□ 0.85
PRAMEF2O60811 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF2O60811 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEF2O60811 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PRAMEF2O60811 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF2O60811 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PRAMEF2O60811 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF2O60811 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PRAMEF2O60811 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEF2O60811 AC079834.2-201ENST00000609776 1949 ntBASIC20.34■□□□□ 0.85
PRAMEF2O60811 MIR572-201ENST00000384983 95 ntBASIC20.34■□□□□ 0.85
PRAMEF2O60811 AC034268.1-201ENST00000441047 882 ntBASIC20.34■□□□□ 0.85
PRAMEF2O60811 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEF2O60811 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAMEF2O60811 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.34■□□□□ 0.85
PRAMEF2O60811 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms