Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PLOD3O60568 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PLOD3O60568 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PLOD3O60568 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PLOD3O60568 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PLOD3O60568 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PLOD3O60568 UNC93B3-201ENST00000308076 687 ntBASIC20.44■□□□□ 0.86
PLOD3O60568 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.44■□□□□ 0.86
PLOD3O60568 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PLOD3O60568 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PLOD3O60568 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.44■□□□□ 0.86
PLOD3O60568 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PLOD3O60568 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PLOD3O60568 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PLOD3O60568 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.43■□□□□ 0.86
PLOD3O60568 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PLOD3O60568 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PLOD3O60568 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.43■□□□□ 0.86
PLOD3O60568 AC068587.7-201ENST00000641602 218 ntBASIC20.43■□□□□ 0.86
PLOD3O60568 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.43■□□□□ 0.86
PLOD3O60568 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PLOD3O60568 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PLOD3O60568 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PLOD3O60568 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 AC242852.2-201ENST00000615738 1807 ntBASIC20.42■□□□□ 0.86
PLOD3O60568 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PLOD3O60568 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.42■□□□□ 0.86
PLOD3O60568 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
PLOD3O60568 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
PLOD3O60568 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.42■□□□□ 0.86
PLOD3O60568 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PLOD3O60568 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PLOD3O60568 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PLOD3O60568 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PLOD3O60568 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PLOD3O60568 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.41■□□□□ 0.86
PLOD3O60568 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PLOD3O60568 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.41■□□□□ 0.86
PLOD3O60568 ECEL1P1-201ENST00000373592 1742 ntBASIC20.41■□□□□ 0.86
PLOD3O60568 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PLOD3O60568 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PLOD3O60568 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PLOD3O60568 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PLOD3O60568 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.4■□□□□ 0.86
PLOD3O60568 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PLOD3O60568 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PLOD3O60568 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PLOD3O60568 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.4■□□□□ 0.86
PLOD3O60568 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PLOD3O60568 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.4■□□□□ 0.86
PLOD3O60568 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PLOD3O60568 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.4■□□□□ 0.86
PLOD3O60568 AL136162.1-201ENST00000607711 1078 ntBASIC20.4■□□□□ 0.86
PLOD3O60568 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PLOD3O60568 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PLOD3O60568 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PLOD3O60568 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PLOD3O60568 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PLOD3O60568 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PLOD3O60568 AC137767.1-201ENST00000602918 1920 ntBASIC20.39■□□□□ 0.86
PLOD3O60568 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PLOD3O60568 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PLOD3O60568 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.39■□□□□ 0.85
PLOD3O60568 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PLOD3O60568 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PLOD3O60568 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.39■□□□□ 0.85
PLOD3O60568 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.39■□□□□ 0.85
PLOD3O60568 AC024257.2-201ENST00000549699 147 ntBASIC20.39■□□□□ 0.85
PLOD3O60568 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.39■□□□□ 0.85
PLOD3O60568 AC010525.1-201ENST00000585559 441 ntBASIC20.39■□□□□ 0.85
PLOD3O60568 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.39■□□□□ 0.85
PLOD3O60568 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PLOD3O60568 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PLOD3O60568 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PLOD3O60568 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.39■□□□□ 0.85
PLOD3O60568 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PLOD3O60568 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PLOD3O60568 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms