Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DLX3O60479 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DLX3O60479 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DLX3O60479 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DLX3O60479 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DLX3O60479 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DLX3O60479 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DLX3O60479 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DLX3O60479 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DLX3O60479 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
DLX3O60479 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
DLX3O60479 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DLX3O60479 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
DLX3O60479 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
DLX3O60479 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DLX3O60479 AL451085.2-201ENST00000605085 799 ntBASIC21.34■■□□□ 1.01
DLX3O60479 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
DLX3O60479 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
DLX3O60479 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
DLX3O60479 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.34■■□□□ 1.01
DLX3O60479 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
DLX3O60479 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.34■■□□□ 1.01
DLX3O60479 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
DLX3O60479 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DLX3O60479 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.33■■□□□ 1.01
DLX3O60479 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
DLX3O60479 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
DLX3O60479 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
DLX3O60479 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DLX3O60479 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.33■■□□□ 1.01
DLX3O60479 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DLX3O60479 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DLX3O60479 UNC93B8-201ENST00000511903 705 ntBASIC21.33■■□□□ 1.01
DLX3O60479 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DLX3O60479 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DLX3O60479 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
DLX3O60479 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DLX3O60479 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DLX3O60479 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DLX3O60479 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.32■■□□□ 1
DLX3O60479 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DLX3O60479 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
DLX3O60479 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DLX3O60479 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.32■■□□□ 1
DLX3O60479 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.32■■□□□ 1
DLX3O60479 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.32■■□□□ 1
DLX3O60479 MIR6724-1-201ENST00000616420 92 ntBASIC21.32■■□□□ 1
DLX3O60479 MIR6724-2-201ENST00000616483 92 ntBASIC21.32■■□□□ 1
DLX3O60479 MIR6724-4-201ENST00000617390 92 ntBASIC21.32■■□□□ 1
DLX3O60479 MIR6724-3-201ENST00000622482 92 ntBASIC21.32■■□□□ 1
DLX3O60479 AL117332.1-201ENST00000622628 974 ntBASIC21.32■■□□□ 1
DLX3O60479 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.32■■□□□ 1
DLX3O60479 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.31■■□□□ 1
DLX3O60479 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DLX3O60479 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.31■■□□□ 1
DLX3O60479 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.31■■□□□ 1
DLX3O60479 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.31■■□□□ 1
DLX3O60479 AC244015.2-201ENST00000616358 1861 ntBASIC21.31■■□□□ 1
DLX3O60479 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DLX3O60479 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DLX3O60479 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.31■■□□□ 1
DLX3O60479 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.31■■□□□ 1
DLX3O60479 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.31■■□□□ 1
DLX3O60479 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.31■■□□□ 1
DLX3O60479 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.31■■□□□ 1
DLX3O60479 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.3■■□□□ 1
DLX3O60479 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DLX3O60479 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DLX3O60479 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DLX3O60479 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DLX3O60479 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DLX3O60479 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
DLX3O60479 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DLX3O60479 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
DLX3O60479 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
DLX3O60479 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
DLX3O60479 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DLX3O60479 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.29■■□□□ 1
DLX3O60479 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
DLX3O60479 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.29■■□□□ 1
DLX3O60479 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
DLX3O60479 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DLX3O60479 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DLX3O60479 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.29■■□□□ 1
DLX3O60479 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DLX3O60479 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.29■■□□□ 1
DLX3O60479 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
DLX3O60479 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.29■■□□□ 1
DLX3O60479 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DLX3O60479 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
DLX3O60479 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
DLX3O60479 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DLX3O60479 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DLX3O60479 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.28■■□□□ 1
DLX3O60479 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DLX3O60479 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DLX3O60479 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.28■■□□□ 1
DLX3O60479 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
DLX3O60479 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.28■■□□□ 1
DLX3O60479 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms